#WARNING:no index is registered index "YP_009725310.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725310.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 2h85_A_2_A_1

Protein Model on 2h85_A_2_A_1 (TEMPLATE: 2h85 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 2 (A) polymer(polypeptide(L)) [347 aa] Putative orf1ab polyprotein :Q6VA80_CVHSA
2 b A 1 (A) polymer(polypeptide(L)) [347 aa] Putative orf1ab polyprotein :Q6VA80_CVHSA 29N 46K 47T 48T 90R 94A 96I(V) 240F 241S 242H 243S(G) 264E(K) 266E 268F 269I 270P 271M 277N 279F 281T 283A 284Q 285T 286G 288S 290C 291V(G) (identity: 85.2 %/88.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2h85_A_2 identity=88.1%
queryA         1:SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG: 100
                :****** **********  ** ******* ******* *** ************************** ********************* **** ****:
2h85_A_2       3:SLENVAYNVVNKGHFDGHAGEAPVSIINNAVYTKVDGIDVEIFENKTTLPVNVAFELWAKRNIKPVPEIKILNNLGVDIAANTVIWDYKREAPAHVSTIG: 102
SecStr          : HHHHHHHHHHHSS         EEEETTEEEEEETTEEEEEEE  SSS HHHHHHHHHTB  S B  HHHHHHTT  EESSSB EETTTTEESSSSEES:    
ExpBur          :ebebbbebbeeeebbeeeeeebebeeeeebbebeeeeeeeeebebebeeebebbbbbbbbbbeebbbbbbbbeebebebbbebbbbbeeeebbbbeebbe:    
Contact         :                            b                bbb                                         b   b b    

queryA       101:VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNL: 200
                :** **********  *  *** ***** *********************** ** ** *** ******** ******* *****  ************ *:
2h85_A_2     103:VCTMTDIAKKPTESACSSLTVLFDGRVEGQVDLFRNARNGVLITEGSVKGLTPSKGPAQASVNGVTLIGESVKTQFNYFKKVDGIIQQLPETYFTQSRDL: 202
SecStr          :S TTTEEESSTTSGGGTTS EEEETTSTTHHHHHHH SSEEEEESS BTTB  EE  S EEETTEEE  SSS    EEEEEETTEE      B      G:    
ExpBur          :bbeebeebeebeeeebeeebbbbbebeeebeeebeebebbbbbbeeebeebeebebbebbbeeeeeeeeeeeebebbbbbbeeeeeeebeeeebbbbbeb:    

queryA       201:QEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD: 300
                :  ******** *********** ******************* ******* ******   **  ************************** ******** :
2h85_A_2     203:EDFKPRSQMETDFLELAMDEFIQRYKLEGYAFEHIVYGDFSHGQLGGLHLMIGLAKRSQDSPLKLEDFIPMDSTVKNYFITDAQTGSSKCGCSVIDLLLG: 302
SecStr          :GG    SHHHHHHHHS HHHHHHHTT TTS HHHHTT B SSSB B   BHHHHHHHHHHS EEEEESS S  SSEEEEEEETTT  EEEEEEEB   HH:    
ExpBur          :eebeeeeebbebbbebeeeebbeeeebeebbbeebbbbebeeeebbbbbbbbbbbbbeeebebeeeeeeeeeebbbebebebeeeebeeeebbbbbbebe:    
Contact         :                                       bbbb                    b b bbbb     b b b bbbb b bb         

queryA       301:DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKL: 345
                :************* ********** ********************:
2h85_A_2     303:DFVEIIKSQDLSVISKVVKVTIDYAEISFMLWCKDGHVETFYPKL: 347
SecStr          :HHHHHHHTS  SSSEEEEEEEETTEEEEEEEEEETTEEEEEEE  :    
ExpBur          :ebbebbeebeeeeeeeebebebbbbebebbbebeeeebebbebee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123