Protein Model on 6ydx_A_1_S_1 (TEMPLATE: 6ydx )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [856 aa] Leucyl-cystinyl aminopeptidase :LCAP_HUMAN
2 b S 1 (A) non-polymer(EDO) 1,2-ETHANEDIOL 956E(K) (identity: 0.0 %/36.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6ydx_A_1 identity=36.4%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSL: 170
                :*   ***    *  *   * * **        * ** *        *  ** **   *       **       **       *         *     *:
6ydx_A_1      40:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHSTGHNIS-----RVTFMSAVSSQEKQAEILEYAYHGQIAIVAPE-AL: 128
SecStr          :  SSS  SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEE S BS EEEE  S EEE-----EEEE  SSS    B EEEE  SSSEEEEE SS- B:    
ExpBur          :eeeeebbebbebeebbbebebebee-----eebebebebbbebeeebeebbbbbeebeee-----ebbbeeeeeeeeeebeebeeeebbbbbbbbee-eb:    

queryA       171:VKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTP----LPEDPNWN: 265
                :     *    *          ***   *  * *  *  * **     **  ******** ** * *  *     ****** **  *      *  *    :
6ydx_A_1     129:LAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSXXXXXGLVQD----: 223
SecStr          : TTEEEEEEEEEEEE BSSSSEEEEEEEE SS  EEEEEEEE TTTTHHHHS B  STT  BEEEEEEEESSS EEEESS- B   -----  EEE----:    
ExpBur          :eeeeebbbebbbebebeeebebbbbbebebeeeeebebbbbbbbbbbbbebbbbbbbbebbbebebebbeeeebbbbbbb-eeebe-----eeeeb----:    

queryA       266:VTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYREN: 365
                :  **    ****** **** *      *  ** *  * * *  *   *  ***  *   * **       *** * *    *** ********* * ** :
6ydx_A_1     224:--EFSESVKMSTYLVAFIVGEMKNLS-QDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREE: 318
SecStr          :--EB    SB GGG  EEEE  EEEE-EEETTEEEEEEE TTSGGGGH--HHHHHHHHHHHHHHHHSSS   SSEEEEEEESS SSSB   TTEEEEEHH:    
ExpBur          :--ebeebbebbbbbbbbbbbebbeee-eebeebebbbbbbeebeebbe--bbbebbbebbebbbeebeeebebebbbbbbbbebbeebbbbbbbbbbbbb:    

queryA       366:SLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASE: 461
                : ** *   **      *   ***************  ************   **            * *    *        *  * * **** *   * :
6ydx_A_1     319:TLLYDSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SS: 410
SecStr          :HH   TTT  HHHHHHHHHHHHHHHHHTTBTTTBEESSGGGGGGTHHHHHHHHHHHHHHH----- GGG THHHHHHHHHHHHHHHHSTT   SS---  :    
ExpBur          :bbbbeeeebbbebbbebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeee-----beebbbebebbebbbebbeebbbebbbbbe---be:    

queryA       462:INTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL: 561
                :     ** * **  ** ** * * **   ******      ***   *       ***   *  *         *   *  **** ***  **      *:
6ydx_A_1     411:VQSSEQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNEVTNQ-----TLDVKRMMKTWTLQKGFPLVTVQKKGKEL: 505
SecStr          :  SHHHHHTTSSHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTSEE HHHHHHHHHHH  S-----S  HHHHHHHHHHSSS EEEEEEEETTEE:    
ExpBur          :beeeeebbbbbbebbebbbbbbbbbbbeebeeeebeebbeebbeebeeeebebeebbebbbeebee-----eeebbbbbebbbebebbbbbbbeeeebeb:    

queryA       562:--SQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV--RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVIN: 657
                :   ** * *             * *  *      **    *               *    **  * *  *** * *    *     **           :
6ydx_A_1     506:FIQQERFFLXXXXXXXXXXX-XYLWHIPLSYVTEGRNYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKD: 604
SecStr          :EEEEEE   -------------    EEEEEEEEETT  EEEEEEEE SSEEEEE SS EEEEESSSSS SSSEEEE HHHHHHHHHHHHH GGGS HHH:    
ExpBur          :ebebeebee-------------eebebbbbbbbbbeeeeeeeeeeebeeeeeebebeeebebbbbbeebbbbbbbbbeeebbeebbebbeeebeebebeb:    

queryA       658:RAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENL: 747
                :**  **  * **   ***   *      *  *    *   **       *     *  * *       **  *    *           *   **    *:
6ydx_A_1     605:RANLINNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSAL: 700
SecStr          :HHHHHHHHHHHHHHTSS HHHHHHHTT GGG   HHHHHHHHHHHH---HHHHHHHHTT H-HHHHHHHHHHHHHTHHHHHT  SS  SSHHHHHHHHHH:    
ExpBur          :bbbbbbbbbbbbebeebebbebeebbebbeebeebbbbebbbebbb---ebbbbbbbeeee-ebbeebbebbbeebeebbeeeebeeeeeebebebbbeb:    

queryA       748:MDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSY: 847
                :            **      *      **  **              **            * *            *  *   *** *     *      :
6ydx_A_1     701:LE---------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKS: 789
SecStr          :HH---------HHHHTT TTHHHHHHHHHHHHHTTTT S   HHHHHHHH--HHHHTSHHHHHHHHHHHHH   HHHHHHHHHHHHT   HHHHHHHHHH:    
ExpBur          :be---------bbbebebeebeeebeebbeebeeeeeeeebebbbbbbbb--bbbbeeeebbebbbebbeebebbbbbebbbebbbbbeeeebbeebbeb:    

queryA       848:TLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKAN: 947
                : ** *  * *     *        *  * ****  ** **      **    *     *  ***   *     *     *  *    *    ***    *:
6ydx_A_1     790:SLNGDNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLN: 887
SecStr          :HHHTSSS GGGHHHHHHHHHHSSTTHHHHHHHHHHTHHHHHHHS TT HHHHHHHHHHHTT   HHHHHHHHHHHHHH HHHH--TSHHHHHHHHHHHHH:    
ExpBur          :bbeeeebbbbbbbbbbebbbbbeebbebbbebbeeebeebeebbebbbebbbbbbebbbebbbeeeebeebeebbeeeeeebb--ebebbebbbeebeeb:    

queryA       948:IKWVKENKEVVLQWF: 962
                :* *   *      * :
6ydx_A_1     888:IQWMEKNLKSLTWWL: 902
SecStr          :HHHHHHHHHHHHHHS:    
ExpBur          :bebbeebbeebeeeb:    
Contact         :        b                                                                                           


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