Protein Model on 6ryf_A_1_I_1 (TEMPLATE: 6ryf )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [856 aa] Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN
2 b I 1 (A) non-polymer(EDO) 1,2-ETHANEDIOL 457T 458P 462I(V) 467Q 470E 471L(M) 935R (identity: 71.4 %/36.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6ryf_A_1 identity=36.1%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGS-: 169
                :**  ***    *  *       **        * *   *  *    *  ** **  *     *  *  **              *  *       *    :
6ryf_A_1       4:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHL-----QISRATLRKXXXXRLSEEPLQVLEHPRQEQIALLAPEP:  93
SecStr          :   SS  SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS  SEEEEE SS -----EEEEEEEE ----   EEE EEEEETTTTEEEEE SS :    
ExpBur          :beeeebbeebebebbbbbbebebee-----eebebbbebebebeeebebbbbbbbeb-----eeeebbbee----eeeeeebeeeeeeebbbbbbebeee:    

queryA       170:LVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPEDPNW: 264
                :*     *       * *     *** * *   **  *   * **     **  ******** ** * *         * *** * *       * **   :
6ryf_A_1      94:LLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIED---: 189
SecStr          :  TT  EEEEEEEEEE BSSSSEEEEEEEE TTS EE-EEEEEE TTTTGGGTS B  STTS BEEEEEEEE TT EEEESS EEEEEEEETTEEEE---:    
ExpBur          :beeebebebbbebebebbebbbbbbebebebeeeeee-ebbbbbbbbbbbbbbbbbbbbbebbbbbbbebebeeebebbbbbeeeeeeeeeeebbbb---:    

queryA       265:NVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRE: 364
                :    *  * ****** *** * *  * *    **     * *  *     ****      * *       ****** *    ***  ******** ****:
6ryf_A_1     190:---HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRE: 284
SecStr          :---EE    SB GGG  EEEE  EEEEEE TTS EEEEEE GGGG--GG HHHHHHHHHHHHHHHHHHS    SSEEEEEEESS SSSEE  TTEEEEEG:    
ExpBur          :---ebeebeebbbbbbbbbbbebeeeeeebeeebebbbbbbeebb--ebbebbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbbbbbbbb:    

queryA       365:NSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINT: 464
                :  ****   ** * *       ************** *************   *        *     *          * **** **** ***      :
6ryf_A_1     285:SALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTP---VEN: 380
SecStr          :GGT   TTT  HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGGH-HHHHHHHHHHHTSTT   SS  ---  S:    
ExpBur          :ebbbbeeeebbbebebebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeebb-beebbebbebbbbebbbebbbe---bee:    
Contact         :                                                                                            bb   b  

queryA       465:PAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQE--------------------AVNNRSIQLPTTVRDIMNRWT: 544
                :**** * **  ** ***  * **   ** * ** *   **    * **    ***                                    *   ** **:
6ryf_A_1     381:PAQIREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKTMMNTWT: 480
SecStr          :HHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTEEE HHHHHHHHHT -----------------------------  HHHHHHHHH:    
ExpBur          :bbebbbbbbebbebbbbbbbbbbeeebeeeebeebbbebbeebbeebbebeebbebbeee-----------------------------eebeebbebbb:    
Contact         :  b  bb                                                                                             

queryA       545:LQMGFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRK: 641
                :** *** **  *  *      ***                * * ** * *          *        *      **   *    *** * *    *  :
6ryf_A_1     481:LQKGFPLITI-TVRGRNVHMKQEHYM----KGXXXXXDTGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDDGWDS: 574
SecStr          :SS S EEEEE-EEETTEEEEEEEE  ----  -----       EEEEEEETTEEEEEEEEE SSE-EEEE SS  S EEESGGG SS EEEETTTHHHH:    
ExpBur          :ebbbbbbbbb-beeeeebebebebbe----ee-----eeeeebbbbbbbbbeeeeeeeeeebeeee-eebebeeeeebbbbbbebebbbbbbbeeebbee:    

queryA       642:IQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFRNNTN: 738
                :    *   * *     **  ** ** * *  *     **   * *  *   **    *  *    ***   *  **    *  *      *         :
6ryf_A_1     575:LTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI-----DKQ: 669
SecStr          :HHHHHHHHGGGS HHHHHHHHHHHHHHHHTTSS HHHHHHHHGGGGG   HHHHHHHHHHHHHHHHHHHTSS HHHHHHHHHHHHHHTHHHH-----HH :    
ExpBur          :bbebbeeeeeebeebbbbbbbbbbbbbbbeeebebeebbebbbbbeebeebbbbbbbbebbbebbbbbbbeebeebbeebbebbbebbeebb-----eeb:    

queryA       739:NWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKEL: 838
                : *                   **      *     * *  * *   *          *   *      * ***            *      **      :
6ryf_A_1     670:TWTD-EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNK: 766
SecStr          : SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT     HHHHHHHH--HHHTTSHHHHHHHHHHHTT   HHHHHHHHHHHTT S H:    
ExpBur          :ebee-eeebeebbbbbebbbbbbebebeebbeebebebeebeeeeeeeebbbbbbbbbb--bbbbeeeebbebbbeebeebebbbbeebbbebbbbbeee:    

queryA       839:WILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALE: 938
                :  *   *      * *  *        *  *  *  * * *   ** **      ** *        *  ***   *     *     *   **  *   :
6ryf_A_1     767:EKLQWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKEN--GSQLRCVQ: 864
SecStr          :HHHHHHHHHHHHTSSS GGGHHHHHHHHHTSTTTHHHHHHHHHHTHHHHHHHH TT HHHHHHHHHHHTT  SHHHHHHHHHHHHTTGGG--TTT HHHH:    
ExpBur          :ebbeebbeebeeeeebebbbbbebbbbbbebbebbebbbebbeebbeebbeebebbbebbeebbebbbebbbeeebbeebeebbeebeee--beebebbe:    
Contact         :                                                                                                b   

queryA       939:QALEKTKANIKWVKENKEVVLQWF: 962
                :*  *    ** *   *      * :
6ryf_A_1     865:QTIETIEENIGWMDKNFDKIRVWL: 888
SecStr          :HHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbebbbebbeebeeebeebb:    


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