Protein Model on 6rqx_A_1_B_1
(TEMPLATE: 
6rqx
)Protein Model on 6rqx_A_1_B_1
(TEMPLATE: 6rqx
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [862 aa] | Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [9 aa] | PSE-LYS-HIS-HIS-ALA-PHE-SER-PHE-LYS | 211Q 213Q(E) 214A(P) 350N(Q) 351A(S) 352G 353A 354M 355E 363R 365N(S) 366S(A) 375S 376S(A) 377S 378N(S) 381R(G) 382V(I) 385V(T) 388H 389E 392H 411E 415S(K) 472F 473D 474A(D) 477Y 478S(D) 750Q(R) 751Y(M) 754V(S) 791N(D) 794S(L) 822V(S) 823N(T) 826D(S) 827K(Q) 829R(E) 858D(E) 861S(Q) 865S(L) 896F(S) 900N(H) (identity: 34.1 %/36.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6rqx_A_1 identity=36.6% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGS-: 169
:** *** * * ** * * * * * ** ** * * * ** * * * * :
6rqx_A_1 49:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHL-----QISRATLRKGAGERLSEEPLQVLEHPRQEQIALLAPEP: 138
SecStr : SS SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS SEEEEE SS -----EEEEEEEEE TTT EEEE EEEEETTTTEEEEE SS :
ExpBur :beeeebbeebebebbbbbbebebee-----eebebbbebebebeeebebbbbbbbeb-----eeeebbbeeeeeeeeeeeebeeeeeeebbbbbbebeee:
queryA 170:LVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPEDPNW: 264
:* * * * *** * * ** * * ** ** ******** ** * * * *** * * * ** :
6rqx_A_1 139:LLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIED---: 234
SecStr : TT EEEEEEEEEE BSSSSEEEEEEEE TTS EE-EEEEEE TTTTGGGTS B STTS BEEEEEEEE TTSEEEESS EEEEEEEETTEEEE---:
ExpBur :beeeeebbbbbebbbebbebbbbbbebebebeeeeee-ebbbbbbbbbbbbbbbbbbbbbebbbbbbbbbebeeebebbbbbeeeeeeeeeeebbbb---:
Contact : b bb
queryA 265:NVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRE: 364
: * * ****** *** * * * * ** * * * **** * * ****** * *** ******** ****:
6rqx_A_1 235:---HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRE: 329
SecStr :---EE SB GGG EEEE EEEEEE TTS EEEEEE GGGG--GG HHHHHHHHHHHHHHHHHHT SSEEEEEEESS SSSEE TTEEEEEG:
ExpBur :---ebeebeebbbbbbbbbbbebeeeeeebeeebebbbbbbeebb--ebbebbbebbbebbebbbeebebebebebbbbbbbbbbbeebbbbbbbbbbbb:
Contact : bbbbbb b
queryA 365:NSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINT: 464
: **** ** * * ************** ************* * * * * **** **** *** :
6rqx_A_1 330:SALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTP---VEN: 425
SecStr :GGT TTT HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGGH-HHHHHHHHHHHTSTT SS --- S:
ExpBur :ebbbeeeeebebebebebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeebb-bbebbebbebbbbebbbbbbbe---bee:
Contact :bb bbbb bb b bb b b b
queryA 465:PAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQE--------------------AVNNRSIQLPTTVRDIMNRWT: 544
:**** * ** ** *** * ** ** * ** * ** * ** *** * ** **:
6rqx_A_1 426:PAQIREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKTMMNTWT: 525
SecStr :HHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTEEE HHHHHHHHHT ----------------------------- HHHHHHHHH:
ExpBur :bbebbbbbbebbebbbbbbbbbbeeebeeeebeebbbebbeebeeebbebeebbebbeee-----------------------------eebeebbebbb:
Contact : bbb bb
queryA 545:LQMGFPVITVDTSTGT---LSQEHFL----LDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEE: 637
:** *** ** * * *** ** * * ** * * * * ** * *** * * :
6rqx_A_1 526:LQKGFPLITI-TVRGRNVHMKQEHYMKGSXXAPDT--------GYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDD: 615
SecStr :HS S EEEEE-EEETTEEEEEEEE TT -- S-------- EEEEEEETTEEEEEEEEE SSE-EEEE SS S EEESGGG SS EEEETTT:
ExpBur :ebebbbbbbb-beeeeebebebbbbeeee--eeee--------eeebbbbbbbbbeeeeeeeeeebeeee-eebebeeeeebbbbbbbbebbbbbbbeee:
queryA 638:NWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFR: 734
: * * * * ** ** ** * * * ** * * * ** * * *** * ** * * * :
6rqx_A_1 616:GWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI----: 711
SecStr :HHHHHHHHHHHHGGGS HHHHHHHHHHHHHHHTTTSS HHHHHHHHGGGGG HHHHHHHHHHHHHHHHHHHTSS HHHHHHHHHHHHHHHHHHH----:
ExpBur :bbeebbebbeeebeebeebbbbbbbbbbbbbbbbeebebeebbbbbbbbeebeebbbbebbbebbeebbbbbbbeebeebbeebbebbbebbeebb----:
queryA 735:NNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALAC: 834
: * ** * * * * * * * * * *** * ** :
6rqx_A_1 712:-DKQTWTD-EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCR: 807
SecStr :-HH SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S HHHHHHHH--HHHTTSHHHHHHHHHHHTT HHHHHHHHHHHTT:
ExpBur :-eebebee-eeebeebbbbbebbbbbbebebeebbeebebebeebeeeeeeeebbbbbbbbbb--bbbbeeeebbebbbeebeebebbbbeebbbebbbb:
Contact : bb b b b bb bb b
queryA 835:SKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGT: 934
: * * * * * * * * * * * ** ** ** * * *** * * * ** :
6rqx_A_1 808:TQNKEKLQWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKEN--GSQL: 905
SecStr : HHHHHHHHHHHHHTSSS GGGHHHHHHHHHTSTTTHHHHHHHHHHTHHHHHHHH TT HHHHHHHHHHHTT SHHHHHHHHHHHHTTGGG--TTT :
ExpBur :beeeebbeebbebbeeeeebbbbbbbebbbbbbebeebbebbbebbeebbeebbeebbbbbebbeebbbbbbebbbeeeebeebeebbeebeee--bbeb:
Contact : b b b b b
queryA 935:RALEQALEKTKANIKWVKENKEVVLQWF: 962
:* * * ** * * * :
6rqx_A_1 906:RCVQQTIETIEENIGWMDKNFDKIRVWL: 933
SecStr :HHHHHHHHHHHHHHHHHHHHHHHHHHHH:
ExpBur :ebbebbbbbbebbbebbeebeeebeebb:
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[assembly_id:1]
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