[pdbjlvh2]Protein Model on 6ifg_B_1_D

Protein Model on 6ifg_B_1_D_1 (TEMPLATE: 6ifg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AMPN_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [432 aa]	Zinc metalloprotease :Q9RVZ5_DEIRA
2	b		D 1 (F)	polymer(polypeptide(L)) [3 aa]	Tripeptides (TYR-SER-ALA)	352G(L) 353A 354M(L) 355E 377S 379K(R) 382V 388H 392H 411E 472F 477Y (identity: 75.0 %/34.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6ifg_B_1 identity=34.4%

queryA       218:RKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEFHTTPKMSTYLLAFIVSEFDY-------VEKQASNGVLIRIWARPSAIA: 310
                :*   ** * *   * *      *    *    *     *   *        *       ** *  **               *      *     *    :
6ifg_B_1     172:RGFLPCNDHPSDPATFTVRVTVPASASAAASGL----FTTQTERNGLKTLTFTQRVPVPTYALGLIVGPLERRTAPDVQLGTQTVHRRDIYAAGLPAGTT: 267
SecStr          :GGTS B  STTS EEEEEEEEEETT EEEESSE----EEEEEEETTEEEEEEEEEEEE GGG  EEEESEEEEEEEEEE SS EEEEEEEEETT  TT  :    
ExpBur          :bbbbbbbbbbebebebbbebbbeeebbbbbbbe----eeeeeeeeeebebbbbbeeebbbbbbbbbbbebeeeeeeebebeeeebebbbbbbeeeeeebe:    

queryA       311:AGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLN: 410
                :   *  *       *    *    ***        *      * *  ** *               ** ***     * *******  **   * * ** :
6ifg_B_1     268:VPEGETARMLR--VLSDWFG----PYP-DEVYGVALLPVRQLALETAGLTTM-----------PATSNRERVRL---HALAHQWFGDQVTLADWADTWLS: 346
SecStr          :  TTHHHHHHH--HHHHHHS----S S-SSEE EEEESS S  B  TTSEEE-----------EGGG  HHHHH---HHHHHHHBTTTB BSSGGGHHHH:    
ExpBur          :beeebbeebbe--bbbebbb----ebb-bebbbbbbbebeeebbbbbbbbbb-----------bbebbeeebbb---bbbbbbbbbbebbbeebbbbbbb:    
Contact         :                                         bbbb                     b b  b     b   b                  

queryA       411:EGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTF: 507
                :**** * * *    **        *   * *    *     * **     *        * ***  *  **  *  *        * * * **  **:
6ifg_B_1     347:EGFATYAELL---WAESQGEDGQAMA-ADWYARLSV---LPSRPLRATREE--------EIFDASAYFRGALALHALRLKVGDAAFGQFLHSYVKTF: 428
SecStr          :HHHHHHHHHH---HHHHTT  HHHHH-HHHHHHHHT---S    SS SSGG--------GTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT:    
ExpBur          :bbbbbbbbbb---bbeeeeeebbebb-eebeeebee---eeebebebeebe--------bbbeebbebbbbbbbbbbbeeeeeeebbebbeebbeeb:    
Contact         :b                                                            b    b

Protein Model on 6ifg_B_1_D_1 (TEMPLATE: 6ifg )

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