Protein Model on 6bv1_A_1_B_1 (TEMPLATE: 6bv1 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [902 aa] Aminopeptidase N :AMPN_PIG
2 b B 1 (B) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 86R(N) 108T(I) 110R 177E 252K (identity: 60.0 %/79.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6bv1_A_1 identity=79.8%
queryA        67:QSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHL: 166
                :*** ******* ** **** **********  *** *** * *** * * **************  *** ******* ** * ** ***** ********:
6bv1_A_1       1:QSKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYT-TQGHMVVLRGVGDSQVPEIDRTELVELTEYLVVHL:  99
SecStr          :   GGGSSS  SSEEEEEEEEEEEE  S  SSS  EEEEEEEEEEEESS EEEEEEE  S EE - SSSS EEEESTT     EEEEEEETTTTEEEEEE:    
ExpBur          :eeeebeeeebeebbebebbebebbbebeeeeeeebebebebebebebeeebebbbbbbbebebe-beeeebebeeeeebebeebeebeebeebbbbbbbb:    
Contact         :                   b                     b b                                                        

queryA       167:KGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNV: 266
                :****     *** *** ******************** ** ******  **************** ********  ******* *** **** ***** *:
6bv1_A_1     100:KGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSV: 199
SecStr          :EEEE TT EEEEEEEEEEE  SSSSEEEEEEEEETTEEEEEEEEE TTTTGGGTS B  STTS BEEEEEEEEETTSEEEESS BSSS EE TT TTEEE:    
ExpBur          :eeebeeeeebebbbebebebbeeebbbbbbebeeeeeebbbbbbbbbbbbbbbbbbbbbbbebbbebebbbbbeeebebbbbbeeeeeeeebeeeeebbb:    
Contact         :          b                                                                          b              

queryA       267:TEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENS: 366
                :*** *** ******* *****  *   * *********** *** *** ************** ** * ********* ******************** :
6bv1_A_1     200:TEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENA: 299
SecStr          :EEB    SB GGG  EEEES EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHTTS  SSSEEEEEEETT TT EE  TTEEEEEHHH:    
ExpBur          :bebeebeebbbbbbbbbbbebeebeeebeeebebebbbebebbeeebbebbbebbbebbebbeebbebebbbebbbbbbbbebeeebbbbbbbbbbebeb:    

queryA       367:LLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPA: 466
                :***** *** ************************  ********************* ********** *  ***************** *** * ****:
6bv1_A_1     300:LLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPA: 399
SecStr          :H   TTT  HHHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHHHHHHHSTTS GGGGHHHHTHHHHHHHHTSTT   S   GGG  SHH:    
ExpBur          :bbbbeebbbbebebebbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbeebbeebebeebbbbebbbebbeebbeeebebbbbeeeebebee:    

queryA       467:QISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNR-SIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLSQEH: 565
                :**** ** ********* **** ** ** ** ******* ****** ** ** *** **    ** ** *** ** *************** **  ** *:
6bv1_A_1     400:QISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGNISQKH: 499
SecStr          :HHHTTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTSEE HHHHHHHHHHHHHT SS   SS HHHHHHHHHSS S EEEEEETTTTEEEEEE:    
ExpBur          :ebeebeeebbebbbbbbbbbbbebbeeebbeebbbbbbeebeeeebebebbbebbbebbeeeeeeebeeebeebbbbbbebbbbbbbebebeebebebeb:    

queryA       566:FLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV-RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIIND: 664
                :****  ***** * * * ***** **  *  *  *** **  ****** *    ***** *****  ***** *** ** ***   * ******** * *:
6bv1_A_1     500:FLLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYD: 599
SecStr          :  S TT    S  TTTT   EEE EEETTEE   EEE SSSEEE GGG   SS  EEESGGG SS EEEE HHHHHHHHHHHHH GGGS HHHHHHHHHH:    
ExpBur          :bbbeeeeeeeeebeeebbbbbbbbbbbeeeebeebbbeeeeebeeebbebeeeebbbbbbebbbbbbbbbbeebbeebbebbeeebeebebbbbbbbbbb:    

queryA       665:AFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNG: 764
                : **** ** ******* *****  *  **** ********* ************* ** *** *** **   * ** * ********** **********:
6bv1_A_1     600:SFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNG: 699
SecStr          :HHHHHHTTSS HHHHHHTTGGGGG  SHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS  SSHHHHHHHHHHHHHHHHTT:    
ExpBur          :bbebbebeebebebbbbbbebbeebeebbbbbbbeebbeebebbbbeeebeebbeebbeebbeebbeebeeebeebeebbeebbebbbbbbbbebbbebb:    

queryA       765:VPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATSTII: 864
                : * **     ** ***  * *********** *********   ***** *   * ********* ***** * * ***** ***************** :
6bv1_A_1     700:LPQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDATSTIN: 799
SecStr          : HHHHHHHHHHHHHHHT TTS  S TTTHHHHHHHHHHH  HHHHHHHHHHHHH  SHHHHHHHHHHHTT   HHHHHHHHTTTT TTTS GGGHHHHHH:    
ExpBur          :beebeebbeebbeebeeeeeeeebebbbbebbbebbbbebeeebbebbbebbeeeeeeebbebbbebbbbbeeeebbeebbeebeeeeebeeebbbebbe:    

queryA       865:SITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTE: 964
                :**  ***** * ************ ************** ****** * ********** *   ******************************* ** *:
6bv1_A_1     800:SIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENKEVVLNWFIE: 899
SecStr          :HHHHSTTHHHHHHHHHHHT TTHHHHSSSS   HHHHHHHHHTT  SHHHHHHHHHHHT TTTT  GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbebeebbebbbebbeeebebbeebeeeeebebeebbebbbebbbeeebbeebeebeeeeeeeebeebeebbeebbeebeebbebbeebeeebbebbee:    

queryA       965:NS: 966
                : *:
6bv1_A_1     900:HS: 901
SecStr          :H :    
ExpBur          :eb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123