Protein Model on 5lhd_C_1_V_1 (TEMPLATE: 5lhd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) C 1 (C) polymer(polypeptide(L)) [905 aa] Aminopeptidase N :AMPN_HUMAN
2 b V 1 (V) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 573N (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5lhd_C_1 identity=100.0%
queryA        63:TTLDQSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYL: 162
                :****************************************************************************************************:
5lhd_C_1      46:TTLDQSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYL: 145
SecStr          :    TTSGGGSSS  TTEEEEEEEEEEEEE S  TT   EEEEEEEEEEEESS  SEEEEE  S EE  BTTBSSEEEEETT     EEEEEEETTTTEE:    
ExpBur          :eeeeeeebebeeebeebbebebbebbbbbebeeeeeeebbbebebebebbbeeebebbbbbbeebebeeeeeeebbbeebeebeeeebeebeebeebbbb:    

queryA       163:VVHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDP: 262
                :****************************************************************************************************:
5lhd_C_1     146:VVHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDP: 245
SecStr          :EEEESS   TT EEEEEEEEEEE  SSSSEEEEEEEEETTEEEEEEEEE TTT GGGTS B  STTS BEEEEEEEEETTSEEEESS BSS  EEETTEE:    
ExpBur          :bbbbeeebeeeeebbbebebebebbeeebbbbbbbbeeeeeeebbbbbbbbbbbbbbbbbbbbbbbbbbebebbbbbeeebebbbbbeeeeeeeebeeee:    

queryA       263:NWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTY: 362
                :****************************************************************************************************:
5lhd_C_1     246:NWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTY: 345
SecStr          :EEEEEEB    SB GGG  EEEE  EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHTTS   SSEEEEEEES  TT EE  TTEEEE:    
ExpBur          :ebbebebeebeebbbbbbbbbbbebeebeeebeeebbbbbbbbeebbeebbbebbbebbbebbebbeebbebebebebbbbbbbbbbeeebbbbbbbbbb:    

queryA       363:RENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEI: 462
                :****************************************************************************************************:
5lhd_C_1     346:RENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEI: 445
SecStr          :EHHHH   TTT  HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTS GGGGHHHHTHHHHHHHHTSTT   S   GGG :    
ExpBur          :bbebbbbbeebbbbebebebbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbbbbeebbeebebeebbbbebbbebbeebbebebebbbbeeeeb:    

queryA       463:NTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLS: 562
                :****************************************************************************************************:
5lhd_C_1     446:NTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLS: 545
SecStr          : SHHHHHTTSSHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHTTEEE HHHHHHHHHHHHHHTT   SS HHHHHHHHHSS S EEEEEETTTTEEE:    
ExpBur          :ebeeebeebeebbbebbbbbbbbbbbebbeeebbeebbbebbeebbeebbebeebbebbbebbeeeeeeeeeebeebbbbbbebbbbbbbebebeebebe:    

queryA       563:QEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQII: 662
                :****************************************************************************************************:
5lhd_C_1     546:QEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQII: 645
SecStr          :EEE  S TT       TTTT   EEE EEETTEE   EEE SSEEE GGG   TT  EEESGGG SS EEEE HHHHHHHHHHHHHHGGGS HHHHHHHH:    
ExpBur          :bebbbbeeeeeeeeebeeebbbbbbbbbbbeeeebeebebeeeebeeebbebeeeebbbbbbebbbbbbbbbbeebbebbeebbeeebeebeebbbbbbb:    
Contact         :          b                                                                                         

queryA       663:NDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACS: 762
                :****************************************************************************************************:
5lhd_C_1     646:NDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACS: 745
SecStr          :HHHHHHHHTTSS HHHHHHTTGGGGG   HHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS  SSHHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbbebeebebebbbebbebbeebeebbbbebbbebbebbebbbbeeebbebbeebbeebbeebbeebeeebeebeeebeebbebbbbebbbebbbe:    

queryA       763:NGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATST: 862
                :****************************************************************************************************:
5lhd_C_1     746:NGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATST: 845
SecStr          :TT HHHHHHHHHHHHHHHHSTTS  S HHHHHHHHHHHHHHS HHHHHHHHHHHHT   HHHHHHHHHHGGG   HHHHHHHHHHHT TTTS GGGHHHH:    
ExpBur          :bebeebeebbeebbeebeeeeeeeebebbbbebbbebbbeeeeeeebebbbeebeeeeeebbbebbbebbbbbeeeebbeebbeebeeeeebeebbbbeb:    

queryA       863:IISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWF: 962
                :****************************************************************************************************:
5lhd_C_1     846:IISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWF: 945
SecStr          :HHHHHHSHHHHHHHHHHHHHSHHHHHHHTSS  S HHHHHHHHHTT  SHHHHHHHHHHHHHTSSS  GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbebbebeebbebbbebbeeebeebbeebeeeebbbeebbebbbebbbeeebbebbeebeeebeebebeebeebbeebbeebeebbebbeebeeebbebb:    

queryA       963:TENSK: 967
                :*****:
5lhd_C_1     946:TENSK: 950
SecStr          :HHT  :    
ExpBur          :eeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123