[pdbjlvh2]Protein Model on 5k1v_A_1_G

Protein Model on 5k1v_A_1_G_1 (TEMPLATE: 5k1v )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AMPN_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [900 aa]	Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN
2	b		G 1 (A)	non-polymer(6PX)	methyl N-[4-amino-3-(L-arginylamino)benzene-1-carbonyl]-L-tyrosinate	211Q(D) 213Q(E) 350N(A) 351A(P) 352G 353A 354M 355E 385V 388H 389E 392H 410N(K) 411E 472F 473D 474A(E) 477Y 896F(Y) (identity: 63.2 %/36.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5k1v_A_1 identity=36.8%

queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLS--QGHRVVLRG--VGGSQPPDIDKTELVEPTEYLV: 163
                :*   ***    *  *     * **  *     *  *         **  ** *** *   * **      *    *        *      *  * * * :
5k1v_A_1      64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157
SecStr          :   SS  SSS EEEEEEEEEEETTTTE-----EEEEEEEEEE  S  SEEEEE  S EEEEEE  BSSSGGG SS  B EEEEEGGGTEEEEE S-S   :    
ExpBur          :eeeeebbeebebebbebbbebebeeee-----bebebebebebeeebeebbbbbeebeeeebebebeebeebeeeeeebeebebeeebbbbbebe-eebe:    

queryA       164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259
                : ***        *     *   * *   *** * *   *      * *      **  *******  ** * *         ***** **     *    :
5k1v_A_1     158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248
SecStr          :TT E--------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B  STT  BEEEEEEEE SS EEEESS- EEEEEE SSS :    
ExpBur          :eeee--------bbbebebebebeeebebbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-eeeeeeeeeeee:    
Contact         :                                                b b                                                 

queryA       260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358
                : **       * ** ****** * **  *       * **   * * *      *  ***      * *     *  *** * * *  ***  *******:
5k1v_A_1     249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340
SecStr          :EEE------EE    SB GGG  EEEE  EEEEEE TT  EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHHT    SSEEEEEEESS SSSEE  TT:    
ExpBur          :bbb------ebeebbebbbbbbbbbbbbbeebebebeeebebbbbbbbebeebbe--bbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbb:    
Contact         :                                                                                           bbbbbb   

queryA       359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458
                :* **** ******  ** * *  *  **************** ***** ** **** * *        *     *   **    *   * * ** * * *:
5k1v_A_1     341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLKEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439
SecStr          :EEEEEHHHH   TTT  HHHHHHHHHHHHHHHHHHHBTTTBEESSGGGTHHHHHHHHHHHHHHHHHH GGG HHHHH-HHHHHHHHHHHTSTT   SS  :    
ExpBur          :bbbbbbebbbbeeebbbbebebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbeebbebbee:    
Contact         :                          b  bb  b                 bb                                               

queryA       459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNN---------RSIQLPTT-----------VRD: 538
                :*    ** ** * **  ** ***  * **  ** *  *  *   **  * * *     **  *                *    *            *  :
5k1v_A_1     440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCXXXXXXXXGVCHSXXXMTSNMLAFLGENAEVKE: 536
SecStr          : --- SHHHHHHT STTTTHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTSEE HHHHHHHHHS  --------  S  ---  TTSHHHHHHHHHHHH:    
ExpBur          :b---eeeeebbbbbeebbebbbbbbbbbbeeebeeeebbebbbebbeebeeebbebeebbebbbebe--------eeeee---eeeeeeebeeebeebee:    
Contact         :             bbb  b                                                                                 

queryA       539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631
                : *  **** * *   *  *     * ** **      **     *     * *  * *                     *       **  *    *** :
5k1v_A_1     537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 632
SecStr          :HHHHHHHS S EEEEEEEETTEEEEEEEE  SS  TTSTT---TTTTTTT    EEEEEEETTEEEEEEEEE SSE-EEEE SS  S EEESGGG SS E:    
ExpBur          :bbebbbebebbbbbbbeeeeeebebebbbbbbbbbeeeee---beebbeebebbbbbbbbbeeeeeeeeebbeeee-eebebeeeeebbbbbbbbebbbb:    

queryA       632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728
                :* *    *    ***   *       *   * * * *  *       **  *  *  *         ** *  *  * **   *      * **     *:
5k1v_A_1     633:VHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 732
SecStr          :EEEETTHHHHHHHHHHH GGGS HHHHHHHHHHHHHHHHHTSS HHHHHHHGGGGGT   HHHHHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHTTHH:    
ExpBur          :bbbeeebbeebbebbeeebeebeeebbbbbbbbbbbbbbbebbebeebbebbebbeebeebbbbebbbebbeebbbbbebeebeebbebbbebbbebbee:    

queryA       729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828
                :           *        *          **      *      ** ****      *       **           *    **        *  * :
5k1v_A_1     733:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 824
SecStr          :HH-----HT  SS - S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S   GGGHHHHH--HHHTTSHHHHHHHHHHHHH   HHHHHHH:    
ExpBur          :bb-----eeeebbe-eeebbebbbbeebbebbbebebeebeeebeebbeebeebeeeeebebbbbebbb--bbbbeeeebbebbbebbeebbbbbbeebb:    

queryA       829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928
                :  **  **    *            *  *        *     ** * ****  **  *      **      *   *  **    **    *    *  :
5k1v_A_1     825:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 924
SecStr          :HHHHHT   HHHHHHHHHHHHH SSS GGGHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHS TTSHHHHHHHHHHHTT  SHHHHHHHHHHHHHHSSS:    
ExpBur          :bbbbbbbeeeebbeebbebbbeeeebbbbbbbebbebbbebeebbebbbebbeeebeebeeebebbbebbbebbebbbebbbbeebbeebeebbeebeee:    
Contact         :                                                                   b                                

queryA       929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967
                :  **        **    ****   *      *   *  :
5k1v_A_1     925:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961
SecStr          :--S   THHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH:    
ExpBur          :--ebebebbebbbbbbebbbebbeebbeebeebbeebee:

Protein Model on 5k1v_A_1_G_1 (TEMPLATE: 5k1v )

Input Residue Numbers for Focused Sites