Protein Model on 5ab0_B_1_V_1 (TEMPLATE: 5ab0 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) B 1 (C) polymer(polypeptide(L)) [882 aa] ENDOPLASMATIC RETICULUM AMINOPEPTIDASE 2 :ERAP2_HUMAN
2 b V 1 (C) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 423D(N) 432K(D) 488S(K) (identity: 0.0 %/36.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5ab0_B_1 identity=36.7%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLS--QGHRVVLRG--VGGSQPPDIDKTELVEPTEYLV: 163
                :*   ***    *  *     * **  *     *  *         **  ** *** *   * **      *    *        *      *  * * * :
5ab0_B_1      64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157
SecStr          :   SS  SSEEEEEEEEEEEEETTTTE-----EEEEEEEEEEESS  SEEEEE  S EEEEEEEEESSSTTS SS  B EEEEETTTTEEEEE S-S   :    
ExpBur          :eeeeebbeebebebbebbbebebeeee-----bebebebbbebeeebeebbbbbeebeeeebebebeebeebeeeeeebeebebeeebbbbbbbe-eebe:    

queryA       164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259
                : ***        *     *   * *   *** * *   *      * *      **  *******  ** * *         ***** **     *    :
5ab0_B_1     158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248
SecStr          :TTEE--------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B  STT  BEEEEEEEE TT EEEESS- EEEEEE TTS :    
ExpBur          :eeee--------bbbebebeeebeeebebbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-beeeeeeeeeee:    

queryA       260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358
                : **       * ** ****** * **  *       * **   * * *      *  ***      * *     *  *** * * *  ***  *******:
5ab0_B_1     249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340
SecStr          :EEE------EE    SB GGG  EEEE  EEEEEE TT  EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHTT    SSEEEEEE SS SSSEE  TT:    
ExpBur          :bbb------bbeebbebbbbbbbbbbbbbeebebebeeebebbbbbbbebeebbe--bbbebbeebbebbbebbebebebebbbbbbbbbbbeebbbbbb:    

queryA       359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458
                :* **** ******  ** * *  *  **************** ***** ******* * *        *     *   **    *   * * ** * * *:
5ab0_B_1     341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439
SecStr          :EEEE GGGT   TTT  HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGTH-HHHHHHHHHHHTSTT   SS  :    
ExpBur          :bbbbbbebbbbeeebbbbeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbebbbebbee:    
Contact         :                                                                b        b                          

queryA       459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538
                :*    ** ** * **  ** ***  * **  ** *  *  *   **  * * *     **  *                                  *  :
5ab0_B_1     440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNXXXXXXXXXXXXXXXXXXXXXXXXXXXGENAEVKE: 536
SecStr          : --- SHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEE HHHHHHHHH ---------------------------  SHHHHH:    
ExpBur          :b---eeeeebbbbbbebbebbbbbbbbbbeebbeeeebeebbbebbeebeeebbebeebbebbbe---------------------------eeeeebee:    
Contact         :                             b                                                                      

queryA       539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631
                : *  **** * *   *  *     * ** **      **     *     * *  * *                     *       **  *    *** :
5ab0_B_1     537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 632
SecStr          :HHHHHHSS S EEEEEEEETTEEEEEEEE  SS  TTSGG---GSSSS      EEEEEEESS  S EEEEE SSE-EEEE SS  S EEESGGG SS E:    
ExpBur          :bbebbbeeebbbbbbbeeeeeebebebbbbbbbbbeeeee---beeebbebebbbbbbbbbeeeeeeeeebbeeee-eeeebeeebebbbbbbbbebbbb:    

queryA       632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728
                :* *    *    ***   *       *   * * * *  *       **  *  *  *         ** *  *  * **   *      * **     *:
5ab0_B_1     633:VHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 732
SecStr          :EEETTTTHHHHHHHHHH GGGS HHHHHHHHHHHHHHHHHTSS HHHHHHHHGGGTT   HHHHHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHTT H:    
ExpBur          :bbbeeebbeebbebbeeebeebeeebbbbbbbbbbbbbbbebbebeebbebbebbeebeebbbbebbbebbeebbebbebeeeeebbebbeebbbeebee:    

queryA       729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828
                :           *        *          **      *      ** ****      *       **           *    **        *  * :
5ab0_B_1     733:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 824
SecStr          :HH-----HH  SSS- S HHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHTTTT S   TTTHHHHH--HHTTSSHHHHHHHHHHHHH S HHHHHHH:    
ExpBur          :bb-----eebebbe-eeebbeeebbeebbebbbebebeebeeebeebbeebeeeeeeeebebbbbebbb--bbbbeeeebbebbbebbeebebbbbbebb:    

queryA       829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928
                :  **  **    *            *  *        *     ** * ****  **  *      **      *   *  **    **    *    *  :
5ab0_B_1     825:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 924
SecStr          :HHHHTT S HHHHHHHHHHHHHTSSS GGGHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHS TT HHHHHHHHHTTTT  STTHHHHHHHHHHHHTTT:    
ExpBur          :bbbbbbbeeeebbeebbebbbeeeebebbbbbebbebbbeeeebbebbbebbeebbeebeeebebbbebbbebbebbbebbbbeebbeebeebbeebeee:    

queryA       929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967
                :  **        **    ****   *      *   *  :
5ab0_B_1     925:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961
SecStr          :--T   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  :    
ExpBur          :--beebebbebbbbbbeebbebbeebbebbeebbeeeee:    


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