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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [888 aa] | M1 family aminopeptidase :AMP1_PLAFQ | |
2 | b | H 1 (A) | non-polymer(R5X) | 3-amino-N-{(1R)-2-(hydroxyamino)-2-oxo-1-[4-(1H-pyrazol-1-yl)phenyl]ethyl}benzamide | 213Q(E) 214A 351A(V) 352G 353A 354M 355E 381R 388H 389E 392H 411E 469S(E) 472F(Y) 477Y (identity: 73.3 %/28.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4r5x_A_1 identity=28.5% |
queryA 134:GHRVVLRGVG-GSQPPDIDKTELVEPTEYL----VVHLKGSLVKDSQYEMDSE--FEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDE: 226 :* * *** * *** ** * * ** * * * * * * * * * * : 4r5x_A_1 60:GEDLVFDGVGLKINEISINNKKLVEGEEYTYDNEFLTIFSKFVPKSKFAFSSEVIIHPETNYALTGLYKS--------KNIIVSQCEATGFRRITFFIDR: 151 SecStr :S EEEE SS EEEEEEETTEE BTTTEEE SSEEEE GGGS SSSEEEEEEEEE GGG TT SEEEEE--------TTEEEEE TTTTGGGTS B S: ExpBur :eeebebbbeebeeeebbbeeeebeeeebbebeeeebbbeeeebeeeebbbbbebbbebeebebbbbbbeb--------eebbbbbbbbebbbebbbbbbe: Contact : bb queryA 227:PAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNW-NVTEFHTTPKMSTYLLAFIVSEFD-----YVEKQASNGVLIRIWARPSAIAAGHGDYALNV: 320 :* * * * * * * * * * * ** * * * * ** : 4r5x_A_1 152:PDMMAKYDVTVTADKEKYPV--LLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQ--WALEC: 247 SecStr :TT EEEEEEEEEETTT E--EEESSEEEEEEEETTTEEEEEEEEEEEE GGG EEEE EEEEEEEEE SSS EEEEEEEEEGGGGGG H--HHHHH: ExpBur :bbbebebbbbbbbeeeebee--bbbbeeeeeeeeeeeebbbbebebeeebbbbbbbbbbbebeeeebebebeeeeeebebebbbeeebeebbb--bbbeb: queryA 321:TGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYL: 420 : * * * *** ***** ** **** * * ** ** ** ** ** * * * ** * *: 4r5x_A_1 248:LKKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDWFQLTLKEGLTVHRENL: 347 SecStr :HHHHHHHHHHHS SSEEEEEEES SSSEE TTEEEEEGGGT TTTS THHHHHHHHHHHHHHHHHHHHTTEEESSGGGHHHHHHHHHHHHHH: ExpBur :beebbebbbebbebbbeeeebbbbbbbbbbebbbbbbbbbbbbbebbbbbbeebbbebbeebbbbbbbbbbbbebeebbbbebbbbbbbbbbbbbbbbbb: Contact : bbbbb b bb b b queryA 421:GADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYL: 504 : * * * * * * *** * * ** * ** * * * * * : 4r5x_A_1 348:FSEEMTKTVTTR----LSHVDLLRSVQFLEDSSPLSHPIRP-ESYVSMENFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYI: 426 SecStr :HHHHHH THHH----HHHHHHHHHHHHHHHHSTT SS -SEES GGGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :bbeeebebebbb----bebbeebbbbbbbbbebebbbbbbb-eebebbbbbebbbbeebbbbbbbbbbebbeeeebeebbeebb: Contact : b b b |