Protein Model on 4nz8_A_1_G_1 (TEMPLATE: 4nz8 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [901 aa] Aminopeptidase N :AMPN_PIG
2 b G 1 (G) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 81K(L) 228A 507F 510Q 511N (identity: 80.0 %/79.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4nz8_A_1 identity=79.7%
queryA        68:SKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLK: 167
                :** ******* ** **** **********  *** *** * *** * * **************  *** ******* ** * ** ***** *********:
4nz8_A_1       1:SKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYT-TQGHMVVLRGVGDSQVPEIDRTELVELTEYLVVHLK:  99
SecStr          :  GGGSSS  SSEEEEEEEEEEEE  S  TTS  EEEEEEEEEEEESS EEEEEEE  S EE - SSSS EEEESTT     EEEEEEETTTTEEEEEEE:    
ExpBur          :eeebeeeebeebbebebbebebbbebeeeeeeebebebebebebebeeebebbbbbbbebebe-beeeebebeeeeebeeeebeebeebeebbbbbbbbe:    
Contact         :             b                                                                                      

queryA       168:GSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVT: 267
                :***     *** *** ******************** ** ******  **************** ********  ******* *** **** ***** **:
4nz8_A_1     100:GSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSVT: 199
SecStr          :EEE TT EEEEEEEEEEE  SSSSEEEEEEEEETTEEEEEEEEE TTTTGGGTS B  STTS BEEEEEEEEETTSEEEESS BSSS EE TT TTEEEE:    
ExpBur          :eebeeeeebebbbebebebbeeebbbbbbebeeeeeebbbbbbbbbbbbbbbbbbbbbbbebbbebebbbbbeeebebbbbbeeeeeeeebeeeeebbbb:    
Contact         :                                                            b                                       

queryA       268:EFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSL: 367
                :** *** ******* *****  *   * *********** *** *** ************** ** * ********* ******************** *:
4nz8_A_1     200:EFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENAL: 299
SecStr          :EB    SB GGG  EEEES EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHTTS  SSSEEEEEEETT TT EE  TTEEEEEHHHH:    
ExpBur          :ebeebeebbbbbbbbbbbebeebeeebeeebebebbbebebbeeebbebbbebbbebbebbeebbebebebebbbbbbbbebeebbbbbbbbbbbebebb:    

queryA       368:LFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQ: 467
                :**** *** ************************  ********************* ********** *  ***************** *** * *****:
4nz8_A_1     300:LFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPAQ: 399
SecStr          :   TTT  HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTS GGGGHHHHTHHHHHHHHTSTT   S   GGG  SHHH:    
ExpBur          :bbbeebbbbebebebbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbeebbeebebeebbbbebbbebbeebbeeebebbbbeeeebebeee:    

queryA       468:ISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNR-SIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLSQEHF: 566
                :*** ** ********* **** ** ** ** ******* ****** ** ** *** **    ** ** *** ** *************** **  ** **:
4nz8_A_1     400:ISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGNISQKHF: 499
SecStr          :HHTTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTEEE HHHHHHHHHHHHHT SS   SS HHHHHHHHHSS   EEEEEETTTTEEEEEE :    
ExpBur          :beebeeebbebbbbbbbbbbbebbeeebbeebbbbbbeebeeeebebeebbebbbebbeeeeeeebeeebebbbbbbbebbbbbbbebebeebebebebb:    
Contact         :                                       b  bb                                                        

queryA       567:LLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV-RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIINDA: 665
                :***  ***** * * * ***** **  *  *  *** **  ****** *    ***** *****  ***** *** ** ***   * ******** * * :
4nz8_A_1     500:LLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDS: 599
SecStr          : SSTT    S  TTTT   EEE EEETTEE   EEE SSSEEE GGG   TT  EEESGGG SS EEEE HHHHHHHHHHHHH GGGS HHHHHHHHHHH:    
ExpBur          :bbeeeeeeeeebeeebbbbbbbbbbbeeeeeeebbbeeeeeeeeebbebeeeebbbbbbebbbbbbbbbbeebbeebbebbeeebeebebbbbbbbbbbb:    

queryA       666:FNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGV: 765
                :**** ** ******* *****  *  **** ********* ************* ** *** *** **   * ** * ********** ********** :
4nz8_A_1     600:FNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGL: 699
SecStr          :HHHHHTTSS HHHHHHTTGGGGG  SHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS  SSHHHHHHHHHHHHHHHHTT :    
ExpBur          :bebbebeebebebbbbbbbbbeebeebbbbbbbeebbeebebbbbeeebeebbeebbeebbeebbeebeeebeebeebbeebbebbbbbbbbebbbebeb:    

queryA       766:PECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATSTIIS: 865
                :* **     ** ***  * *********** *********   ***** *   * ********* ***** * * ***** ***************** *:
4nz8_A_1     700:PQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDATSTINS: 799
SecStr          :HHHHHHHHHHHHHHHTSTTS  S GGGHHHHHHHHHHH  HHHHHHHHHHHHH  SHHHHHHHHHHHTT   HHHHHHHHHHTT TTTS GGGHHHHHHH:    
ExpBur          :eebeebbeebbeebeeeeeeeebebbbbebbbebbbbeebeebbebbbebbeeeeeeebbebbbebbbbbeeeebbeebbeebeeeeebeeebbbebbbe:    

queryA       866:ITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTEN: 965
                :*  ***** * ************ ************** ****** * ********** *   ******************************* ** * :
4nz8_A_1     800:IASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENKEVVLNWFIEH: 899
SecStr          :HHHSTTHHHHHHHHHHHHGGGGTTSSSSS   HHHHHHHHHTT  SHHHHHHHHHHHT  SS   GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbebeebbebbbebbeeebebbeebeeeeebebeebbebbbebbbeeebbeebeebeeeeeeeebeebeebbeebbeebeebbebbeebeeebbebbeee:    

queryA       966:S: 966
                :*:
4nz8_A_1     900:S: 900
SecStr          : :    
ExpBur          :b:    


Input Residue Numbers for Focused Sites

ex) 2,15,123