Protein Model on 4jbs_B_1_F_1 (TEMPLATE: 4jbs )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(AMPN_HUMAN) B 1 (B) polymer(polypeptide(L)) [854 aa] Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN
2 b F 1 (F) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 84S(H) 232E(N) 271T 273P(V) 274K 509Y (identity: 50.0 %/35.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4jbs_B_1 identity=35.9%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLSQGHRVVLRGVGGSQP----PDIDKTELVEPTEYLV: 163
                :*   ***    *  *     * **  *     *  *         **  ** *** *   * **           *        *      *  * * * :
4jbs_B_1      64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEXXXXXXXPGKELKVLSYPAHEQIALLVP-EKLT: 157
SecStr          :  SSS  SSB   EEEEEEEEETTTTE-----EEEEEEEE  BSS  SEEEEE  S EEEEEEEEE -------  EE EEEEETTTTEEEEE S-S   :    
ExpBur          :eeeeebbeebebebbebbbebebeeee-----bebebebebebeeebebbbbbbeebeeeebebeee-------eeeebeebeeeeebbbbbebe-eebe:    
Contact         :             b                                                                                      

queryA       164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259
                : ***        *     *   * *   *** * *   *      * *      **  *******  ** * *         ***** **     *    :
4jbs_B_1     158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248
SecStr          :TT  --------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B  STTSEEEEEEEEEE TT EEEESS- EEEEEE TTS :    
ExpBur          :eeee--------bebbbebeeebbeebbbbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-eeeeeeeeeeee:    
Contact         :                                                                     b                              

queryA       260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358
                : **       * ** ****** * **  *       * **   * * *      *  ***      * *     *  *** * * *  ***  *******:
4jbs_B_1     249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340
SecStr          :EEE------EE    SEEGGG  EEEE  EEEEEE SS  EEEEEE STTGGGHH--HHHHHHHHHHHHHHHHH     SSEEEEEEESS SSSEE  TT:    
ExpBur          :bbb------bbeebeebbbbbbbbbbbebeebebebeeebebbbbbbbebeebbe--bbbebbeebbebbbebbebebebebbbbbbbbbbbeebbbbbb:    
Contact         :            b bb                                                                                    

queryA       359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458
                :* **** ******  ** * *  *  **************** ***** ** **** * *        *     *   **    *   * * ** * * *:
4jbs_B_1     341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLKEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439
SecStr          :EEEEETTTT   TTT  HHHHHHHHHHHHHHHHHHHBTTTEEESSTTSTHHHHHHHHHHHHHHHHHH GGG HHHHH-HHHHHHHHHHHSSTT   SS  :    
ExpBur          :bbbbbbebbbbbeebbbbebebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbebbbebbee:    

queryA       459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538
                :*    ** ** * **  ** ***  * **  ** *  *  *   **  * * *     **  *                                  *  :
4jbs_B_1     440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVKE: 536
SecStr          : --- SHHHHHHT STTTTHHHHHHHHHHHHTT HHHHHHHHHHHHHHTTTEEE HHHHHHHHH  -----------------------------   TH:    
ExpBur          :b---eeeeebbbbbbebbebbbbbbbbbbbeebeeeebeebbbebbeebeeebbebebbbebbbee-----------------------------eebee:    
Contact         :                                                  b                                                 

queryA       539:IMNRWTLQMGFPVI--TVDTSTGTLSQEHFL--LDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNY: 634
                : *  **** * *      *     * ** **                * *  * *                     *       **  *    *** * *:
4jbs_B_1     537:MMTTWTLQKGIPLLXXXXDGCSLRLQQERFLQGVXXXXXXXXXXXERYLWHIPLTXXTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYIVHY: 635
SecStr          :HHHHHHTS S    ----  SB  B         -----------        B --  S      B   SS -B  B SS  S    SGGG SS     :    
ExpBur          :bbebbbebebbbbb----eeeebebbbebbebee-----------eeeebebbbb--eeeeeeeeeeebeeee-eebebeeeeebebbbbbbebbbbbbb:    

queryA       635:DEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTPLFI: 731
                :    *    ***   *       *   * * * *  *       **  *  *  *         ** *  *  * **   *      * **     *   :
4jbs_B_1     636:EGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVI-: 734
SecStr          :TTTHHHHHHHHHHTTGGGS HHHHHHHHHHHHHHHHTTSS HHHHHTTTSGGGT   HHHHHHHHHHHHHHHHHHHHSS  SGGGHHHHHHHHSSHHHH-:    
ExpBur          :eeeebebbbebbeeebeebeebbbbbbbbbbbbbbbeeeeebebbbebbebbeebebbbbbbbbbebbeebbebbeeeeeeebbebbbebbbeebeebb-:    

queryA       732:HFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAA: 831
                :        *        *          **      *      ** ****      *       **           *    **        *  *   *:
4jbs_B_1     735:----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKILYA: 827
SecStr          :----HH  SSS- S HHHHHHHHHHHHHHHTTT HHHHHHHHHHHHHHHHHTS S   HHHHHHHH--HHHTTSHHHHHHHHHHHHT S HHHHHHHHHH:    
ExpBur          :----eebebee-eeebbeebbbeebbebbbebebeebeeebeebbeebeeeeeeeebebbbbebbb--bbbbeeeebbebbbebbeebebbbbeebbbeb:    

queryA       832:LACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFG: 931
                :*  **    *            *  *        *     ** * ****  **  *      **      *   *  **    **    *    *    *:
4jbs_B_1     828:LSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ--G: 925
SecStr          :HHT  SHHHHHHHHHHHHH SSS GGGHHHHHHHHTTSGGGHHHHHHHHHHSHHHHHHHS TTSHHHHHHHHHHHTT  SHHHHHHTTTHHHHT ST--T:    
ExpBur          :bbbbeeeebbeebbebbbeeeebebbbbbebbebbbeeeebbebbbebbeeebeebeeebebbbebbbbbbebbbebbbbeeebeebeebbeebeee--b:    

queryA       932:SGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967
                :*        **    ****   *      *   *  :
4jbs_B_1     926:SHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961
SecStr          :   HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH :    
ExpBur          :eebebbebbebebebbbebbeebbebbeebbeeeee:

Input Residue Numbers for Focused Sites

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