[pdbjlvh2]Protein Model on 3rjo_A_1_B

Protein Model on 3rjo_A_1_B_1 (TEMPLATE: 3rjo )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AMPN_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [408 aa]	Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN
2	b		B 1 (A)	non-polymer(EDO)	1,2-ETHANEDIOL	947N 950W (identity: 100.0 %/27.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3rjo_A_1 identity=27.3%

queryA       548:GFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQT: 644
                :*** **  *  *      ***                * * ** * *          *        *      **   *    *** * *    *     :
3rjo_A_1       1:GFPLITI-TVRGRNVHMKQEHYM----XXXXXXXXXXYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDDGWDSLTG:  94
SecStr          : EEEEEE-EEETTEEEEEEEEE --------------    EEEEEEESS SS EEEEE SSE-EEEE SS  S EEEEESSSS  EEE HHHHHHHHHH:    
ExpBur          :ebbbbbb-beeeeebebebeeee--------------eeeebebebbbeeeeeeeeeebeeee-eebebeeebebbbbebeeeeebbbbbeeeebeebbe:    

queryA       645:QLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWR: 741
                : *   * *     **  ** ** * *  *     **   * *  *   **    *  *    ***   *  **    *  *      *          * :
3rjo_A_1      95:LLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI-----DKQTWT: 189
SecStr          :HHHHHGGGS HHHHHHHHHHHHHHHHHTSS HHHHHHHHGGGGG  SHHHHHHHHHHHHHHHHHHTTSS HHHHHHHHHHHHHHHHHHH-----HH  SS:    
ExpBur          :bbeeebeebeeebbbebbbbbbebbeeeebebeebbebbbbbeebeebebbeebbebbeebbbbbbbeebeebbebbbebbbebbeebb-----eebebe:    

queryA       742:EIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWIL: 841
                :                  **      *     * *  * *   *          *   *      * ***            *      **        *:
3rjo_A_1     190:D-EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKL: 286
SecStr          : - S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S   GGGHHHHH--HHHTTSHHHHHHHHHHHHH   HHHHHHHHHHHTT S HHHH:    
ExpBur          :e-eeeeeeeebbbebbbbbbebebeebbeebeeebeebeeeeeeeebeebbbbbbb--bbbbeeeebbebbbebbeebeeeeeeebbbebbbbbeeeebb:    

queryA       842:NRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQAL: 941
                :   *      * *  *        *  *  *  * * *   ** **      ** *        *  ***   *     *     *    *  *   *  :
3rjo_A_1     287:QWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKEN--XSQLRCVQQTI: 384
SecStr          :HHHHHHHHHTSSS GGGHHHHHHHHHTSTTTHHHHHHHHHHHHHHHHHHH TT HHHHHHHHHTTTT  SHHHHHHHHHHHHTTTT ---   HHHHHHH:    
ExpBur          :eebbebbbeeeebeeeebbebbbbbbebeebbebbbebbeeebeebbeebebeeeebeebbebbbebbbeeeebeebeebbeebeee---eebebbeebb:    

queryA       942:EKTKANIKWVKENKEVVLQWF: 962
                :*    ** *   *      * :
3rjo_A_1     385:ETIEENIGWMDKNFDKIRVWL: 405
SecStr          :HHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebeebbebbeebbeebeebb:    
Contact         :     b  b

Protein Model on 3rjo_A_1_B_1 (TEMPLATE: 3rjo )

Input Residue Numbers for Focused Sites