Protein Model on 3qnf_A_1_E_1 (TEMPLATE: 3qnf )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [696 aa] Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN
2 b E 1 (A) non-polymer(ZN) ZINC ION 355E 388H 392H 411E (identity: 100.0 %/38.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3qnf_A_1 identity=38.6%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNY---TLSQGHRVVL--RGVGGSQPPDIDKTELVEPTEYLVVH: 165
                :**  ***    *  *       **        * *   *  *    *  ** **  *     **  *    *          *      *  * * * * :
3qnf_A_1      55:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGXXXXLSEEPLQVLEHPRQEQIALLAP-EPLLVG: 148
SecStr          :   SS  TTEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS EEEEEEE  S EEEEEEEEE ---- EEEE EEEEEGGGTEEEEEEE-EEE BT:    
ExpBur          :beeeebbeebebebbebbbebebee-----eebbbebebebebeeebebbbbbbbebebeebbbeee----eeebebeeeeeeeeebbbbebe-eebeee:    

queryA       166:LKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPE: 260
                :*    *            * *     *** * *   **  *   * **     **  ******** ** * *         * *** * *       * *:
3qnf_A_1     149:LPYTVV--------IHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIE: 239
SecStr          : EEEEE--------EEEEEE BSSSSEEEEEEEE TTS EE-EEEEEE TTTTGGGTS B  STTS BEEEEEEEE TT EEEESS EEEEEEEETTEEE:    
ExpBur          :eebbbb--------bebebebbeeeebbbbbebebeeeeee-ebbbbbbbeebbbbbbbbbbbbebbbbbbbebebeeebebbbbbeeeeeeeeeeebbb:    

queryA       261:DPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLV: 360
                :*       *  * ****** *** * *  * *    **     * *  *     ****      * *       ****** *    ***  ******** :
3qnf_A_1     240:D------HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLT: 331
SecStr          :E------EE    SB GGG  EEEE  EEEEEE TT  EEEEEE TTTG--GGGHHHHHHHHHHHHHHHHHHTS  SSSEEEEEEETT  SSEE  TTEE:    
ExpBur          :b------bbeebeebbbbbbbbbbbbbeeeeeebeeebebbbbbbeeeb--eebebbbebbbebbebbbebbebebebebbbbbbbbebeeebbbbbbbb:    
Contact         :                                                                                              b     

queryA       361:TYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPAS: 460
                :****  ****   ** * *       ************** *************   *        *     *          * **** **** ***  :
3qnf_A_1     332:TYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTP--: 428
SecStr          :EEEGGGT   TTTS TTHHHHHHHHHHHHHHHHHBTTTEEESSGGGHHHHHHHHHHHHHHHHHHH GGG HHHHH-HHHHHHHHHHHTSTT   SS  --:    
ExpBur          :bbebebbbbbeeeeeeeeebebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbeeebeebbee--:    
Contact         :                           b   b                  b                                                 

queryA       461:EINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQE--------------------AVNNRSIQLPTTVRDIM: 540
                :            *  ** ***  * **   ** * ** *   **    * **    ***                                    *   *:
3qnf_A_1     429:-VENXXXXXXXXDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKTMM: 527
SecStr          :-   --------  HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTEEE HHHHHHHHTT -----------------------------  HHHHH:    
ExpBur          :-eee--------eeeebbbbbbbbbbbbebbeeeebeebbbebbeebeeebbebeebbebbeee-----------------------------eebeebb:    

queryA       541:NRWTLQMGFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEE: 637
                :* **** *** **  *  *      ***                * * ** * *          *        *      **   *    *** * *   :
3qnf_A_1     528:NTWTLQKGFPLITI-TVRGRNVHMKQEHYM----KXXXXXXXTGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDD: 621
SecStr          :HHHHHS S EEEEE-EEETTEEEEEEEE  ---- -------      EEEEEEESS  S EEEEE SSE-EEEE SS  S EEESGGG SSSEEEETTT:    
ExpBur          :ebbbebbbbbbbbb-beeeeebebebeebe----e-------eeeebbbbbbbbbeeeeeeeebbbeeee-eebebeeebebbbbbbbbbbbbbbbbeee:    

queryA       638:NWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFR: 734
                : *      *   * *     **  ** ** * *  *     **   * *  *   **    *  *    ***   *  **    *  *      *     :
3qnf_A_1     622:GWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI----: 717
SecStr          :HHHHHHHHHHHHGGGS HHHHHHHHHHHHHHHHTTSS HHHHHHHHGGGGG  SHHHHHHHHHHHHHHHHHHHHSS HHHHHHHHHHHHHHHHHHH----:    
ExpBur          :ebeebbebbeeebeebeeebbbbbbbbbbbbbeeeebebeebbebbebbeebeebbbbebbbebbeebbeebeeeeeeeeeeebbebbbebbbebb----:    

queryA       735:NNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMEN: 782
                :     *                   **      *     * *  * * :
3qnf_A_1     718:-DKQTWTD-EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKES: 763
SecStr          :-HH    S- SSTTHHHHHHHHHHHHTTTT TTHHHHHHHHHHHTT  :    
ExpBur          :-eebeeee-eeebbbeebbeebbebbeeeeeeebeeeeeeeeeeeeee:    


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