Protein Model on 2yd0_A_1_F_1 (TEMPLATE: 2yd0 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [858 aa] ENDOPLASMIC RETICULUM AMINOPEPTIDASE 1 :ERAP1_HUMAN
2 b F 1 (A) non-polymer(K) POTASSIUM ION 470E 935R (identity: 100.0 %/36.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2yd0_A_1 identity=36.6%
queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNY---TLSQGHRVVL--RGVGGSQPPDIDKTELVEPTEYLVVH: 165
                :**  ***    *  *       **        * *   *  *    *  ** **  *     **  *    *          *      *  * * * * :
2yd0_A_1       4:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGXXXXLSEEPLQVLEHPRQEQIALLAP-EPLLVG:  97
SecStr          :   SS  SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS EEEEEEE SS EEEEEEEEE ---- EEEE EEEEETTTTEEEEEEE-EEE TT:    
ExpBur          :eeeeebbeebebebbebbbebebee-----eebebbbebebebeeebeebbbbbeebebeebbbeee----eeeeebeeeeeeebbbbbbebe-eebeee:    

queryA       166:LKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPE: 260
                :*    *            * *     *** * *   **  *   * **     **  ******** ** * *         * *** * *       * *:
2yd0_A_1      98:LPYTVV--------IHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIE: 188
SecStr          :  EEEE--------EEEEEE BSSSSEEEEEEEE TTS EE-EEEEEE TTTTHHHHS B  STTS BEEEEEEEE TT EEEESS EEEEEEEETTEEE:    
ExpBur          :eebbbb--------bebebebbebbbbbbebebebeeeeee-ebbbbbbbbbbbbbbbbbbbbbebbbbbbbbbebeeebebbbbbeeeeeeeeeeebbb:    

queryA       261:DPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLV: 360
                :*       *  * ****** *** * *  * *    **     * *  *     ****      * *       ****** *    ***  ******** :
2yd0_A_1     189:D------HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLT: 280
SecStr          :E------EE    SB GGG  EEEE  EEEEEE TTS EEEEEE TTTG--GG HHHHHHHHHHHHHHHHHTT    SSEEEEEEESS SSSEE  TTEE:    
ExpBur          :b------ebeebeebbbbbbbbbbbebeeeeeebeeebebbbbbbebbb--ebbebbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbbbb:    

queryA       361:TYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPAS: 460
                :****  ****   ** * *       ************** *************   *        *     *          * **** **** ***  :
2yd0_A_1     281:TYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTP--: 377
SecStr          :EEEGGGT   TTT  HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGGH-HHHHHHHHHHHTSTT   SS  --:    
ExpBur          :bbbbebbbeeeebbebebebebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeebb-beebbebbebbbbebbbebbbe--:    

queryA       461:EINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRDIM: 540
                :    **** * **  ** ***  * **   ** * ** *   **    * **    ***                                    *   *:
2yd0_A_1     378:-VENPAQIREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVDVKTMM: 476
SecStr          :-  SHHHHHHTSSHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHTTEEE HHHHHHHHHT ----------------------------   HHHHH:    
ExpBur          :-beebeebbbbbeebbebbbbbbbbbbeeebeeeebeebbbebbeebeeeebebeebbebbeee----------------------------eeebeebb:    
Contact         :         b                                                                                          

queryA       541:NRWTLQMGFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEE: 637
                :* **** *** **  *  *      ***                * * ** * *          *        *      **   *    *** * *   :
2yd0_A_1     477:NTWTLQKGFPLITI-TVRGRNVHMKQEHYM----KGXXXXXDTGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDD: 570
SecStr          :HHHHSS SEEEEEE-EEETTEEEEEEEEE ----  -----       EEEEEEESS S  EEEEE SSE-EEEE SS  S EEESGGG SS EEEE TT:    
ExpBur          :ebbbebbbbbbbbb-beeeeebebebebbe----ee-----eeeeebbbbbbbbbeeeeeeeeeebeeee-eebebeeeeebbbbbbebebbbbbbbeee:    

queryA       638:NWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFR: 734
                : *      *   * *     **  ** ** * *  *     **   * *  *   **    *  *    ***   *  **    *  *      *     :
2yd0_A_1     571:GWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI----: 666
SecStr          :HHHHHHHHHHH GGGS HHHHHHHHHHHHHHHTTTSS HHHHHHHHGGGGG   HHHHHHHHHHHHHHHHHHHTSS HHHHHHHHHHHHHHHHHHH----:    
ExpBur          :ebeebbebbeeebeebeebbbbbbbbbbbbbbbeeebebeebbebbebbeebeebbbbebbbebbbebbbbbbbeebeebbeebbebbbebbeebb----:    

queryA       735:NNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALAC: 834
                :     *                   **      *     * *  * *   *          *   *      * ***            *      **  :
2yd0_A_1     667:-DKQTWTD-EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCR: 762
SecStr          :-HT  SS - S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S   GGGHHHHH--HHHTTSHHHHHHHHHHHTT   HHHHHHHHHHHTT:    
ExpBur          :-eebebee-eeebbebbbbbebbbbbbebebeebbeebebebeebeeeeeeeebebbbbbbbb--bbbbeeeebbebbbeebeebebbbeeebbbebbbb:    

queryA       835:SKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGT: 934
                :      *   *      * *  *        *  *  *  * * *   ** **      ** *        *  ***   *     *     *   **  :
2yd0_A_1     763:TQNKEKLQWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKEN--GSQL: 860
SecStr          :   HHHHHHHHHHHHH SSS GGGHHHHHHHHHTSTTTHHHHHHHHHHTHHHHHHHH TT HHHHHHHHHHHTT  SHHHHHHHHHHHHHTGGG--TTT :    
ExpBur          :beeeebbeebbebbeebeebbbbbbbebbebbbebeebbebbbebbeeebeebbeebbbbbebbeebbbebbebbbeeeebeebeebbeebeee--beeb:    

queryA       935:RALEQALEKTKANIKWVKENKEVVLQWF: 962
                :*   *  *    ** *   *      * :
2yd0_A_1     861:RCVQQTIETIEENIGWMDKNFDKIRVWL: 888
SecStr          :HHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbebbbbbbebbbebbeebeeebeebb:    
Contact         :b                                                                                                   


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