Protein Model on 2xq0_A_1_B_1 (TEMPLATE: 2xq0 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AMPN_HUMAN) A 1 (A) polymer(polypeptide(L)) [625 aa] LEUKOTRIENE A-4 HYDROLASE :LKHA4_YEAST
2 b B 1 (A) non-polymer(BES) 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID 213Q(E) 351A(Y) 352G 353A(G) 354M 355E 388H 389E 392H 407L(F) 411E 477Y (identity: 66.7 %/31.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2xq0_A_1 identity=31.5%
queryA       210:TQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNW--NVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPS: 307
                : *  *  **  ***** *  *  *      *         **   *    **     *   *        **              *  *        * :
2xq0_A_1     144:SQLEAIHARSLFPCFDTPSVKSTFTASIESP---------LPVVFSGIRIEDXXXXTNIYRFEQKVPIPAYLIGIASGDL----SSAPIGPRSTVYTEPF: 230
SecStr          :E  TTTTGGGTS B  STT  EEEEEEEE S---------S EEESSEE   ----  EEEEEEEEEE GGG  EEESS ----EEEEEETTEEEEE HH:    
ExpBur          :bbbbbbbbbbbbbbbbbbebbbebebbbebe---------bebbbbbeeeee----eeebebebebebbbbbbbbbbbeb----eebebeeebebebbee:    
Contact         :   b                                                                                                

queryA       308:AIAAGHGDYALNVTG-------PILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVT: 400
                :            *          *     * **                  * **     *     **        **      ******** * *****:
2xq0_A_1     231:RLKDCQWEFENDVEKFIQTAEKIIFEYEWGTYDI--------LVNVDSYPYGGMESPNM-TFATPTLL----AHDRSN----IDVIAHELAHSWSGNLVT: 313
SecStr          :HHHHHHHHHTTTHHHHHHHHHHHS    SS   E--------EE  TT  SSEE  TT -EEE GGG ---- SSS S----THHHHHHHHHTTBTTTEE:    
ExpBur          :bbeebbebbeebbbebbebbbebbbebebeebbb--------bbbbebbbebbbbbbbb-bbbbbbbb----beeeeb----beebbbbbbbbbbbbbbb:    
Contact         :                                                  bbbbb                                bb  b        

queryA       401:IEWWNDLWLNEGFASYVE--YLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLS------: 492
                :   **  *****   * *    **   ***     *    *       *        **     *        *    * **   *  *   *       :
2xq0_A_1     314:NCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQN--SIDSMKDPERFSTLVQNLNDNTDPDDAFSTVPYEKGFNLLFHLETILGGKAEFD: 411
SecStr          :ESSGGGTHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHH--HHHT SSHHHHTSSS    SSS GGGG SSHHHHHHHHHHHHHHHHTTSHHHHH:    
ExpBur          :bbbbbbbbbbbbbbbbbbbbbbbeeeeeeebbbebbebbeebee--bbeebeeeeebbbbbbebeeebebeebebebbebbbbbbbbebbeebeeeeebb:    
Contact         :      b   b                                                                   b                     

queryA       493:---EDVFKQGLASYLHTFAYQNTIY: 514
                :      **      * **    * *:
2xq0_A_1     412:PFIRHYFKKFAKKSLDTFQFLDTLY: 436
SecStr          :HHHHHHHHHTTTEEE HHHHHHHHH:    
ExpBur          :ebbeebbeebbeebbbbbbbbbbbb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123