Protein Model on 1ygs_A_3_A_2 (TEMPLATE: 1ygs )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(SMAD3_HUMAN) A 3 (A) polymer(polypeptide(L)) [190 aa] SMAD4 :SMA4_HUMAN
2 b A 2 (A) polymer(polypeptide(L)) [190 aa] SMAD4 :SMA4_HUMAN 246E 260F(Y) 261T(V) 262D 264S 268R 272G 273L(Q) 275S 277V 279R 284E (identity: 75.0 %/48.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1ygs_A_3 identity=48.9%
queryA       229:PAFWCSISYYELNQRVGETFH--ASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG-GEVFAECLSDSAIFVQSPNCNQRYG: 325
                :*  **** * *    *****    * *  ****  ***   ***** **** *  * *  * *** ** *   * * *   **** * ****       *:
1ygs_A_3       2:PEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAG: 101
SecStr          : SEEEEEEEEETTEEEEEEEEEETT SEEEEESS  TT SSEEE TT   TT  HHHHHHHTTTTT EEEEEETTTEEEEEE SSS EEEE HHHHHTTT:    
ExpBur          :eeebbbbbbbbeeeebeeebebeeebeebbbbeeeeeeeeeebbbeebebeeeeeebeebbeebeebbebbbeeebebebebebeebbbbbbebbbeeee:    
Contact         :                 b               bbb b   b   bb b b b    b                                          

queryA       326:WHPA-TVCKIPPGCNLKIFNNQE----------------------------------FAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVT: 390
                :  *   * ** *    * *                                                     *  * * *  *********  * **   :
1ygs_A_3     102:RAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDDLRRLCILRMSFVKGWGPDYPRQSIK: 201
SecStr          :  TT   EEE TT EEEEE HHHHHHHHHHHHHHHT ----------------------------------- HHHHHTTEEEEESS   STTSS SSGG:    
ExpBur          :eeeeebebebeeeeeeebbbbebbeeebeeebeeeee-----------------------------------eeebeebbbbebbbbebbbeeeeeebbe:    

queryA       391:STPCWIELHLNGPLQWLDKVLTQM: 414
                : ****** **   ** ** **  *:
1ygs_A_3     202:ETPCWIEIHLHRALQLLDEVLHTM: 225
SecStr          :GSSSEEEEEEHHHHHHHHHHHHT :    
ExpBur          :ebbbbbbbebebbeebbeebeeee:    


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