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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(SMAD3_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [221 aa] | SMAD4 :SMAD4_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [236 aa] | SMAD4 :SMAD4_HUMAN | 241N(D) 246E 247T 249H(K) 362A(G) 363V 364Y(D) 367T(R) 397E 399H 401N(H) 404L 405Q 407L 408D 411L 412T(H) (identity: 58.8 %/48.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1g88_A_1 identity=48.9% |
queryA 229:PAFWCSISYYELNQRVGETFH--ASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG-GEVFAECLSDSAIFVQSPNCNQRYG: 325 :* **** * * ***** * * **** *** ***** **** * * * * *** ** * * * * **** * **** *: 1g88_A_1 36:PEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAG: 135 SecStr : SEEEEEEEEETTEE S EEEETT SEEEEES SSEEE SS TT HHHHHHHTT TT EEEEEETTTEEEEEE SSS EEEE HHHHHHTT: ExpBur :beebbbbbbbbeeeebeeebebeeebeebbbbeeeeeeeeeebbbeebebeeeeeebeebbeebeebbebbbeeebbbebebebeebbbbbbebbbeeee: Contact : b bb b queryA 326:WHPA-TVCKIPPGCNLKIFNNQEFAALLAQSVNQGFE----------------------------------AVYQLTRMCTIRMSFVKGWGAEYRRQTVT: 390 : * * ** * * * * * * * * ********* * * : 1g88_A_1 136:RAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGIGVDDLRRLCILRMSFVKGWGPDYPSQSIK: 235 SecStr : TT EEEE TT EEEEE HHHHHHHHHHHHHHHHHTT -------------------------- HHHHGGGGEEEEEES STTSS SSGG: ExpBur :beeeebbbbbeeebebebbbbebbbeebeeebeebeeeeee--------------------------eeeeeeeebeebbbbbbbbbebbbeeeebeebe: Contact : bbb b queryA 391:STPCWIELHLNGPLQWLDKVLTQM: 414 : ****** ** ** ** ** *: 1g88_A_1 236:ETPCWIEIHLHRALQLLDEVLHTM: 259 SecStr :GSSSEEEEEEHHHHHHHHHHTTTS: ExpBur :ebbbbbbbebebbeebbeebeeeb: Contact : b b b bb bb bb |