[pdbjlvh2]Protein Model on 5hdb_C_1_GA

Protein Model on 5hdb_C_1_GA_1 (TEMPLATE: 5hdb )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ITAL_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [453 aa]	Integrin alpha-IIb :ITA2B_HUMAN
2	b		GA 1 (D)	non-polymer(5YB)	N-(4-carbamimidoylbenzoyl)-beta-alanyl-L-alpha-aspartyl-L-phenylalanine	400R(F) (identity: 0.0 %/38.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5hdb_C_1 identity=38.0%

queryA       396:TPEVRAGYLGYTVTW--LPSRQKTSLLASGAPRYQH-MGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRG-: 491
                : **   ** ** *          *     ***      * *                   * *  ****      **  **   **  **** * * *  :
5hdb_C_1     227:NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDS-----YYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDLL-VGAPL-YMESRAD: 319
SecStr          : GGGTT  TTSEEEEE  SS SSS EEEEEETTHHHHT EEEEE T-----T  EEEEEE SSTTS TTSEEEEE SSSSSS EEE-EEETT- EEEETT:    
ExpBur          :eeebeebebbebbbebbbeeeeeeebbbbbbbbbbeeebbbbbbbb-----ebeeebbbebeeeebbbbbbbbbbbbbeeeeebbb-bbbbe-beeeeee:    
Contact         :    b                                                                                               

queryA       492:------GRVFIYQR----RQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI: 578
                :      ***           **      * *   *  **** **  * *   **  * ** **       * *  * *   **   ***         * :
5hdb_C_1     320:RKLAEVGRVYLFLQPRGPHALGAPSLL-LTGTQLY--GRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLD-SPFPTGS: 415
SecStr          :TEEEE BEEEEE   STT    S SEE-EE  STT--  BTSEEEEEE SS SSS EEEEEETT STTSSBEEEEE EETTEE SS SEEEE- SS TT :    
ExpBur          :eeebbbbbbbbbebeeeeeebeeeeee-bbbeeee--bebbbbbbebbebbeeeeebbbbbbbebbeebebbbbbbbbeeebbeeeeebebe-bebeeeb:    

queryA       579:QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPV: 615
                :  ** *  *  *    *  *  ***    *  *    **:
5hdb_C_1     416:A-FGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQPV: 453
SecStr          : -BTSEEEEEE SSSSSS EEEEEETTTTEEEEE B   :    
ExpBur          :b-bbebbebeebbeeeebbbbbbbbbebbebbbbbbeee:

Protein Model on 5hdb_C_1_GA_1 (TEMPLATE: 5hdb )

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