[pdbjlvh2]Protein Model on 5ffg_A_1_N

Protein Model on 5ffg_A_1_N_1 (TEMPLATE: 5ffg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ITAL_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [591 aa]	Integrin alpha-V :ITAV_HUMAN
2	b		N 1 (A)	non-polymer(MES)	2-(N-MORPHOLINO)-ETHANESULFONIC ACID	683R(K) 718V(F) 719Q(R) 720D (identity: 25.0 %/32.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5ffg_A_1 identity=32.4%

queryA       403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494
                :**** *              ** **     * *        *   *      * *   ***      *   *       ******         *  * *:
5ffg_A_1     221:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 315
SecStr          : BTSEEEEE SSSSSS EEEEEETTHHHHT EEEEE ----TTT  EEEEEE SSTTS TTSEEEEE  SSSS  EEE-EEETT EEE TTS EEE  EE:    
ExpBur          :ebbbbbbbbebeeeeebbbbbbbbebeebebbbbbbb----beebeeeeebebeeeebebbbbbbbbbbbeeeebbbb-bbbbebebeeeeeeeebbbbb:    

queryA       495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW---------FG: 582
                :     *  *      * *       *** **  * *   **  * *  **       * *******  **   ***  **       **         **:
5ffg_A_1     316:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSGCPPSFG: 406
SecStr          :EEEEE TTS EEEEEEE SSTT--S TTSEEEEEE TT SSS EEEEEETT SGGG  EEEEEEEETTEE SS SEEEE -------     SSS   TT:    
ExpBur          :bbbbbeeebebeeeebebeeee--bebbbbbbebbbbbeeeeebbbbbbbbbbeeebbbbbbbbbeeebbbeeeebebeb-------ebeeeeeeebbbb:    

queryA       583:RSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLD: 678
                : *  *  *    *  *  ***      *    ***          *         **           *   *     *   *        *    * **:
5ffg_A_1     407:YSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLD: 501
SecStr          :SEEEEEE TT SSS EEEEEEGGGTEEEEE B  EEEEEEEEEEESSEE TT   SB TTSS B  EEEEEEEEEEE SSS  S-----EEEEEEEEEET:    
ExpBur          :ebbebebebbebebbbbbbbbbbbbebbbbbbbbbbebeeebebeeeebebeeeebebeeeeeebbbbebebbbebebeeebee-----ebebebebbbb:    

queryA       679:GHRTR---RRGLFPGGR---HELRRNIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSL: 733
                :        ** **   *   *     *     * *              *   **       *:
5ffg_A_1     502:KLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL: 564
SecStr          :TT  TT    EEETTTSSSEEEEEEEEETTS  EEEEEEEEE  GGG    SS EEEEEEEEE:    
ExpBur          :eeeeeeeeebbbbbeeeeeeeeeebebebeeeeeebebebbbeeeeebeeeeeebbbbbebeb:    
Contact         :    bbbb                                       bbb

Protein Model on 5ffg_A_1_N_1 (TEMPLATE: 5ffg )

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