Protein Model on 5es4_A_1_I_1 (TEMPLATE: 5es4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) A 1 (A) polymer(polypeptide(L)) [1080 aa] Integrin alpha-X :ITAX_HUMAN
2 b I 1 (I) branched(oligosaccharide) alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 65N 92S(N) (identity: 50.0 %/37.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5es4_A_1 identity=37.7%
queryA        26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
                : ***      *    **  **  * *  *  * ****      * ** ****   ** * *  *          **  **        *** *     * :
5es4_A_1       1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG:  98
SecStr          :  EEEEEEEEEE  STT--TTSEEEEETTTEEEEEEEEEEEETTEEEEEEEEETTT  EEE      TTSBS  BTSEEEEETTTTEEEEEEEEEEEEET:    
ExpBur          :bbbbeeeebebeeebeb--bbebbbbbbeeebbbbbbeeeeeeeebbbbbebbeeeeebeeeebeebeebeebbbbebbbeeeeeeebbbbbbbbebeee:    
Contact         :                                           b                           b                            

queryA       121:QNTYLSGLCYLFRQNLQGP--MLQGRP-GFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDP: 217
                : * ** *** *      **    *  *   ***     * *** *** *     *     *   *       * **   ***    * * *        *:
5es4_A_1      99:RNMYLTGLCFLL-----GPTQLTQRLPVSRQECPRQEQDIVFLIDGSGSISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFEEFRRSSNP: 193
SecStr          :TEEEEEEEEEEE----- TTS  EEESSS        EEEEEEEE  TTS HHHHHHHHHHHHHHHTTS TTTEEEEEEEESSSEEEEE HHHHHH SST:    
ExpBur          :eeebbbbbbbbb-----beeeebeebbeeeeeeeeeebbbbbbbbbbeebeeeebeebbebbebbbeebeeeebbbbbbbbbeeeeebbbbeebeeeeeb:    

queryA       218:DALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITD----GEATDSGNIDAAKD---IIRYIIGIGKHFQTKESQETLHKFASKPASEF: 310
                :  **  *      * *  **  *    *    *** ** * ** ***    *   *        *   **** ** *  **   *   *   ****  * :
5es4_A_1     194:LSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEH: 293
SecStr          :HHHHHT     S B HHHHHHHHHHHTTSGGGT  SS EEEEEEEESS  BS SS HHHHHHHHHHHTEEEEEEEESGGGSSHHHHHHHHHHS SSHHHH:    
ExpBur          :eeebeebebbeeebebbbbbebbbeebbeeeebbbeebbbbbbbbbbbeeeebeeebeebbeebeeeebebbbbbbbeebeeeebeebbeebbbeeeeeb:    

queryA       311:VKILDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTW: 410
                :      *  ***    *  **  ****      **  *    * **       * ****   * **           ***         *  ****  * :
5es4_A_1     294:IFKVEDFDALKDIQNQLKEKIFAIEGTETTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYLGYS-TE: 391
SecStr          :EEEESSSSTHHHHHHHHHHHHHS    SSTT     TTS  TTSSB   SS  EEEE SHHHHTBEEEE  TTS-  EEE   TT GGGTT  BTSE-EE:    
ExpBur          :beebeebeebeebeeebbeebeeeeeeeeeeeeeeeeebbbbbebbbbbeebbbbbbbbbebebbbbbbbbeee-eeeebebeeeeeebeebebbeb-be:    

queryA       411:LPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI----YQRRQLGFEE: 506
                :*        *  ******* *    *   *    *       *********  ** **** ** * * *****  *   *** *         *      :
5es4_A_1     392:LALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDA: 489
SecStr          :EEE SS EEEEEEETTGGGTBEEEEEE--EETTEEEEEEEEE SSTT  BTS EEEE SS SSS  EEEEE TT B SSEEE EEEEE   SS      E:    
ExpBur          :bbeeeeebbbbbbbbebeebbbbbbbb--eeeeebeebbebebeeeebebbbbbbbbebeeeebbebbbbbbbebeeeeebbbbbbbbebebeeebeeeb:    

queryA       507:VSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGA: 603
                :*  * *  * * **** * * * * *** * **  *** **   **** * *  *   **  **** * *  *  * **    *  **  *** * ****:
5es4_A_1     490:V--LYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGA: 587
SecStr          :E--E   SSEEEEEETS EEEEEE SSSSSEEEEEEETTHHHHTBEEEEEEEETTTEE SS SEEEEHHHH TT  SBTSEEEEEE TTSSSS EEEEEE:    
ExpBur          :e--bebeeebeebebbbbbbebeebbbeebbbbbbbbbbbeeeebbbbbbbbeeeeebbeeeebbbbbeeeeeebeebbbbbbbebebbebebebbbbbb:    

queryA       604:ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LRRNIA: 700
                :  *   *  ***      * * *****    **           *   **  *        *   *    *  * **  *   *  *       * *   :
5es4_A_1     588:RGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLSRVRV: 686
SecStr          :TTEEEEEEE  EE EEEEEEEESSSB HHHHS  SSTT S- EEEEEEEEEEE S  TT  STTTS EEEEEEEEESTTSS    EESSSSSSEEEEEEE:    
ExpBur          :eebbbbbbbbbbbbebeebebeeeebeeebbeeeeeeeee-eeebebbbbbebeeeeeebeeebbeebebebebbbbeeeeeebbebeeeeeeebeeeee:    

queryA       701:VTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARSRAL: 793
                :      *  *    * ** *   **   *** *             **       *** *        *   ******* *  *  **  ***      *:
5es4_A_1     687:LGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSL: 774
SecStr          :E SS EEEEEEEEE SS S SSS EEEEEEEEE------------     SSTT    EE TTS  EEEEEE B   S TT      EEEEEE TT  SE:    
ExpBur          :beeeeeebebebebebebeebeebbebebebeb------------ebeebeeeebbeebbbeeeeeeeebebbbebeeeeeeeeeeebbbebebeeeeeb:    

queryA       794:RLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890
                :       *  *    *  ** *        * *** * *       *       *   *  *       **     **  *        *        **:
5es4_A_1     775:LVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGD: 873
SecStr          :EETTB EEEEEEEEEESSS EES EEEEEEETTEEEE     SS  SS    EEEEEEEETTT-TEEEEEEEE S EE TT EEEEEEEEEE TT    S:    
ExpBur          :bbeeeeebebebebebeebebebbbbbbebbeebebeeeeeeeeeeeebebebebeeeeeeee-eeeebebebbeeebeeeeeeebebbbebeeebebee:    

queryA       891:SVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---VGV: 975
                :   * ***   *         * **     *  *         *  * *  *     *  *   * ***     *  *       *     ***   * *:
5es4_A_1     874:RLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMDVEV: 969
SecStr          :EEEEEEEEE TT  ---- SSS   EEEEEEEEEEE EEEEE S         SS SS EEEEEEEEEEEE SSS EEEEEEEEEEEEETTEESS S EE:    
ExpBur          :ebebbbebebbbee----eeeeeeeeeeebebebbbbbbbeebeeeeeebebeeeeeeeeeebebebbbbbebebebebbbbbebbeebeeeebbeebeb:    

queryA       976:PQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFHLYG:1069
                :  *    *     *    **           *        * * *** *       *      * *    *  *      *  *   * *  *    * *:
5es4_A_1     970:SHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQLPG:1065
SecStr          :E  --SS     EEEEE      HHHHHHSS -EE TTTSEEEEEEEEEEEE TT EEEEEEEEEEESTTHHHHT S  -EEEEEEEEE  TTTEEE SS:    
ExpBur          :ebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebeeebbbbbebebebeebebbeebebbbebebbbbbbeebeeeeb-bbbbbbebebeeeeeebeee:    

queryA      1070:SNA:1072
                :  *:
5es4_A_1    1066:QEA:1068
SecStr          :TTG:    
ExpBur          :eee:    


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