Protein Model on 4neh_A_1_D_1 (TEMPLATE: 4neh )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) A 1 (A) polymer(polypeptide(L)) [1084 aa] Integrin alpha-X :ITAX_HUMAN
2 b D 1 (D) branched(oligosaccharide) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 91T(V) 92S(N) 116S(H) (identity: 0.0 %/37.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4neh_A_1 identity=37.6%
queryA        26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
                : ***      *    **  **  * *  *  * ****        ** ****   ** * *  *          **  **        *** *     * :
4neh_A_1       1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAADQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG:  98
SecStr          :  B SSS EEEE  STT--TTSEEEEETTTEEEEEEEEEEEETTEEEEEEEE TTT SEEE      TT BS  BTSEEEEEETTEEEEEEEEEEEEEET:    
ExpBur          :bbbbeeeebebebebeb--bbebbbbbbeeebbbbbbeeeeeeebbbbbbebbbeeeebeebebeebeebeebbbbebbbeeeeeebbbbbbbbbebebe:    
Contact         :                                                                      bb                       b    

queryA       121:QNTYLSGLCYLFRQNLQGP--MLQGRP-GFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDP: 217
                : * ** *** *      **    *  *   ***     * *** *** *     *     *   *       * **   ***    * * *        *:
4neh_A_1      99:RNMYLTGLCFLL-----GPTQLTQRLPVSRQECPRQEQDIVFLIDGSGSISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFEEFRRSSNP: 193
SecStr          :TEEEEEEEEEEE----- TTS  EEESSS     B  EEEEEEEE STTS THHHHHHHHHHHHHHHTS TTTEEEEEEEESSSEEEEE HHHHHT SSG:    
ExpBur          :ebebbbbbbbbb-----beeeeeeebeeeebebeeeebbbbbbbbbbeebeeeebebbbebbebbbebbeeebbbbbbbbbbeeeeebbbbeebeebeeb:    

queryA       218:DALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEA-------TDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEF: 310
                :  **  *      * *  **  *    *    *** ** * ** ****          *      *  **** ** *  **   *   *   ****  * :
4neh_A_1     194:LSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEH: 293
SecStr          :GGTTSS     S B HHHHHHHHHHHTTSGGGT  SSSEEEEEEEE S  BB S  HHHHHHHHHHTTEEEEEEE GGGTTSHHHHHHHHHHS SSGGGS:    
ExpBur          :eeebeebeeeeeebebbebbeebbeebbeeeebbbeebeebbbbbbbbebeebeeebeebbeebeeeebebbbbbbeebeeeeebeebbbebbbeeeeeb:    

queryA       311:VKILDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTW: 410
                :      *  ***    *  **  ****      **  *    * **       * ****   * **         * ***         *  ****  * :
4neh_A_1     294:IFKVEDFDALKDIQNQLKEKIFAIEGTETTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-DPTFINMSQENVDMRDSYLGYS-TE: 391
SecStr          :EEETT TTHHHHH   B    B GGG  TTT B  SSTT  EEEEEEEETTEEEEEETTHHHHT  EEE  TTS-  EEE   TT GGGTTS TTSE-EE:    
ExpBur          :bbebeeeebbeeebeeeeebebbeeeeeeeebeebeebbbbbbebbbbbeebbbbbbbbbebebbbbbbbbeee-eeeebebeeeeeebeebebbeb-bb:    

queryA       411:LPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI----YQRRQLGFEE: 506
                :*        *  ******* *    *   *    *       *********  ** **** ** * * *****  *   *** *         *      :
4neh_A_1     392:LALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDA: 489
SecStr          :EEESSSSEEEEEEETTGGGT EEEEEE--EETTEEEEEEEEE SSTTS TTSEEEEE TT SSS  EEEEEEEEEE SS EEEEEEEE   TT      E:    
ExpBur          :bbeeeeebbbbbbbbebeebbbbbbbb--eeeeebeeebebebeeeebbbbbbbbbbebeeeebbbbbbbbbbebeeeeebbbbbbbebbeeeeebeeee:    

queryA       507:VSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGA: 603
                :*  * *  * * **** * * * * *** * **  *** **   **** * *  *   **  **** * *  *  * **    *  **  *** * ****:
4neh_A_1     490:V--LYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGA: 587
SecStr          :E--E   SS TT  BTSEEEEEE SSSSS  EEEEEETTHHHHTBEEEEE EETTTEE SS SEEEEHHHH SS  SBTSSEEEEE  SSSSS EEEEEE:    
ExpBur          :e--bbbeeebeebebbebbbebeebbeeebbbbbbbbbbbeeeebbbbbbbbeeeebbbeeeebbbbbeeeeeebeebbebbbbebebbebbbebbbbbb:    

queryA       604:ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGR-HELRRNIA: 700
                :  *   *  ***      * * *****    **           *   **  *        *   *    *  * **  *   *  *       * *   :
4neh_A_1     588:RGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKTRSLSRVRV: 686
SecStr          :TTEEEEEEB  EEEEEEEEEEESSSB TTTS   S SS  - EEEEEEEEEEEEES TT  S S   EEEEEEEEESTT SS S EETTTSSSEEEEEEE:    
ExpBur          :eebbbbbbbebbbebbeebebeeeebebebbeeeeeeeee-eeebebbbbbebbeebeebeeeeebebebebebbbbeeeeeebbebeeeeeeebebeee:    

queryA       701:VTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARSRAL: 793
                :      *  *    * ** *   **   *** *             **       *** *        *   ******* *  *  **  ***      *:
4neh_A_1     687:LGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSL: 774
SecStr          :E SEEEEEEEEEEE S  S  SS EEEEEEEEE------------EE  BGGGTSB  EE TT   EEEEEE B  B SSS B     EEEEE TT SSE:    
ExpBur          :bebeeeebebebbbebeeeeeeebbebebbbeb------------ebeebeebeebebbbbeeeeeebebebbbbbeeeeeeebebebbbebebeeeeeb:    

queryA       794:RLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890
                :       *  *    *  ** *        * *** * *       *       *   *  *       **     **  *        *        **:
4neh_A_1     775:LVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGD: 873
SecStr          :EETT  EEEEEEEEE  SS EEEEEEEEEEETTEEE        SSSS S   EEEEEEETTT-TEEEEEEEEEEEEE SS EEEEEEEEEE TT    S:    
ExpBur          :bbeeeeebebebebebeeeebbbbbbebebeebbebeeeeeeeeeeeeeeeebeeeeeeeeee-eeebbebebeeeebeeeeeeebebbbebeeebebee:    

queryA       891:SVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---VGV: 975
                :   * ***             * **     *  *         *  * *  *     *  *   * ***     *  *       *     ***   * *:
4neh_A_1     874:RLLLTANVSSESNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLCFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMDVEV: 969
SecStr          :EEEEEEEEE SS  ----   S   EEEEEEEEEEE EEEEE S S  EEEEETT TT EEEEEEEEEEEE SSS EEEEEEEEEEEEETTEESEEEEEE:    
ExpBur          :ebebbbebebeeee----eeeeeeeeeeebebebbbbbbbeebeebbeebebbeeeeeeeeebebebbbbbebebebebbbbbebbbebeeeebbeebeb:    

queryA       976:PQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFHLYG:1069
                :  *    *     *    **           *        * * *** *       *      * *    *  *      *  *   * *  *    * *:
4neh_A_1     970:SHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQLPG:1065
SecStr          :E  --SS     EEEEE      HHHHHHHS -EE TTTSEEEEEEEEEEEE TT EEEEEEEEEEESGGGGGT  SEE-EEEEEEEEE  TTTEEE TT:    
ExpBur          :ebe--eeeeeeeeeeeeeeeeeeeeeebeeee-bbeeebbbbbebebebeebbbebebbbbbebebbbbbbeebeeeeb-ebbbbbebebeeeebebeee:    

queryA      1070:SNA:1072
                :  *:
4neh_A_1    1066:QEA:1068
SecStr          : GG:    
ExpBur          :eee:    


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