Protein Model on 3vi3_C_1_FA_1 (TEMPLATE: 3vi3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) C 1 (C) polymer(polypeptide(L)) [589 aa] Integrin alpha-5 :ITA5_HUMAN
2 b FA 1 (C) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 413S 437Q(N) 443G(S) 444H(D) 448V(L) (identity: 20.0 %/32.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3vi3_C_1 identity=32.1%
queryA       353:GISADLSR-GHAVVGAVGAKDWAGGFLDLKADLQDDTF--------IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAPRYQ-HMGRVLLFQ: 437
                :* **     *  * *  *   * *  *                         *          **** *     *   *     * *      * *    :
3vi3_C_1     167:GFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQIAESYYPEYLINLVQGQLQTRQASSIYDDSYLGYSVAVGEFSGDDTEDFVAGVPKGNLTYGYVTILN: 266
SecStr          :TSEEEE TTS EEEEETTHHHHTBEEEEE HHHHHHH  TTSS    TT EE     GGG S  BTSSEEEE  SSSSS EEEEEETT SSSS EEEEE :    
ExpBur          :bebbbbbeebbbbbbbbbbbeebbbbbbbbbebbeebbeeeebeeebeebbebeeeeeeeeebebbbbbbbbbbeeeeebbbbbbbbebeeeebebbbbe:    
Contact         :                                                                          b                        b

queryA       438:EPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDI: 531
                :    *          * *  ****      **  **   **  ****          *  ***  *     * *    *        ****   * * * :
3vi3_C_1     267:----GSDIRSLYNFSGEQMASYFGYAVAATDVNGDGLDDLL-VGAPLLMDRTPDGRPQEVGRVYVYLQHPAGIEPTPTLTLTGHDEFGRFGSSLTPLGDL: 361
SecStr          :----TTT  EEEEEE SSTTS SSSEEEEE SSSSSS EEE-EEETT EEE TT  EEE  EEEEE EETTEE SS SEEEE  STT  GGGEEEEEE T:    
ExpBur          :----beebeeeeebebeeeebbbbebbbbbbbbeeeeebbb-bbbbebeeebeeeeebbbbbbbbbbbeeebbeeeeeeebebeeeebebbbbbbebbbb:    
Contact         :     bb   b                                                                                         

queryA       532:NGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI-QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFS: 625
                :  **  *** ***      ** *  * *  ***   ***        *     **    *  ** * *  *  **        *   ** *         :
3vi3_C_1     362:DQDGYNDVAIGAPFGGETQQGVVFVFPGGPGGLGSKPSQVLQPLWAASHTPDFFGSALRGGRDLDGNGYPDLIVGSFGVDKAVVYRGRPIVSASASLTIF: 461
SecStr          :T SSS EEEEEETT STTS  EEEEE   TTSS SS SEEE  SS   SS   TTSEEEEEE  SSSSS EEEEEEGGGTEEEEE B  EE  EE  EES:    
ExpBur          :beeeeebbbbbbbebbeeebbbbbbbbbbeebbeeeeebebebeeeeeeeebebbebbbbeeebbebebbbbbbbbbbbbebbbbbbebbbebebebeee:    

queryA       626:PAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGRLVAN---LTYTLQLDGHR---TRRRGLFPGGRHE-LRRNIAVTTSM--SCTDFSFHF--: 714
                :**     *  *  *         *   *           *  **     *  ****         * **   *   *             *         :
3vi3_C_1     462:PAMFNPEERSC--SLEGNPVACINLSFCLNAS-------GKHVADSIGFTVELQLDWQKQXXXXXRALFLASRQATLTQTLLIQNGAREDCREMKIYLRN: 552
SecStr          :     TT   S-- SSSS   EEEEEEEEE  -------  SS SSEEEEEEEE   S  ----- EEETTTT SEEEEEEEE SSSS EEEEEEEEE  :    
ExpBur          :eeebeeeeeeb--ebeeeebbbbebbbbbebe-------beeebeebbbebebebeeeee-----ebbbeeeeebeeeeebebeeeeeeeeeebebbeee:    

queryA       715:PVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPILRPSLHSET: 762
                :        ***   *****      * *           *** **   :
3vi3_C_1     553:EXXXXXXLSPIHIALNFSL--DPQAPVDSHG--------LRPALHYQS: 590
SecStr          : ------   B  EEEEEE-- TTS   SSS--------   EE TT :    
ExpBur          :e------eeebebbbbbeb--beeeeebeee--------bebbebeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123