Protein Model on 3v4p_C_1_DA_1 (TEMPLATE: 3v4p )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) C 1 (C) polymer(polypeptide(L)) [581 aa] Integrin alpha-4 :ITA4_HUMAN
2 b DA 1 (C) non-polymer(TRS) 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 372D(Y) 401A(F) (identity: 0.0 %/34.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3v4p_C_1 identity=34.7%
queryA       322:DLFTELQKKIYVIEGTSKQD-LTSFNMELSS--SGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAG-YLGYTVTWLPSR-QK: 416
                :** *** * *        **    *     *   ***        * ** *   * *                       *  * **** *     * * :
3v4p_C_1     138:DLRTELSKRI----APCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVY--NITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQH: 231
SecStr          :T  GGG EEE---- TT  TT   SSTTTTT  BTSSEEE SSEEEEEETTHHHHTBEEEEE--ETTTTEEEE   TT  S TT  BTSSEEEE SS SS:    
ExpBur          :ebebeeeeeb----ebbeeeebeeebeeebbbebbebbebbeebbbbbbbbbeeebbbbbbb--eeeeeeebbbeeeeeebeeebebbebbbbbebeeee:    
Contact         :                                                     b                            b                 

queryA       417:TSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGF---EEVSELQGD: 513
                :*     ***     *    *                *   *****   * **   **   **  ***        **** *     *         * * :
3v4p_C_1     232:TTEVVGGAPQHEQIGKAYIFSIDEK--ELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLL-VGAPMQSTIREEGRVFVYINSGSGAVMNAMETNLVGS: 328
SecStr          :  EEEEEETTGGGT EEEEEEE SS--SEEEEEEEE SSTT  TTSEEEEE  SSSSS EEE-EEETT  SSS   EEEEEEE SSSS EEE SS B TT:    
ExpBur          :eebbbbbbbebeebbbbbbbbeeee--bbeeeeebebeeeebbbbbbbbbbbbbeeeebbbb-bbbbbbeeeebbbbbbbbbbeeeebebeeeeeebebe:    

queryA       514:PGYPLGRFGEAITALTDINGDGLVDVAVGAPLEE--QGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGA--ESQMIV: 609
                :  *   **** *  * **  **  *** *** *   *** ** ***  * *   ****** *       ** ** *  *    *  ******        :
3v4p_C_1     329:DKYA-ARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAVL: 427
SecStr          :  TT-  TTSEEE   STT SSS  EEEEETTHHHHT EEEEE EETTEE SS SEEEEGGGT TT  SEEEEEEEEE SS SSS EEEEEETTTTEEEE:    
ExpBur          :eeeb-bbbbebbbbbbebbeeeeebbbbbbbebeeebbbbbbbbbbeebbbeeebbbbebeeeeeebbbbbbbbbbebebbebebebbbbbbbebbbbbb:    

queryA       610:LSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGRLVANLTYTLQLDGHRTRR---RGLFP--GGRHELRRNIAVTT-: 703
                :*  ****      *  *         *              * **  *       *  *  * *   **  *      *  *   *        * *   :
3v4p_C_1     428:LRTRPVVIVDASLS-HPESVNRTKFDCVENGWPSV--CIDLTLCFSYKG--KEVPGYIV--LFYNMSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSR: 520
SecStr          :E B  EEEEEEEEE-  SB  TT   S BTTB   --EEEEEEEEEEE --SS  SEEE--EEEEEESS S  SS   SEE STTTT SEEEEEEEEESS:    
ExpBur          :bbbebbbebebebe-eeeebeeeeeebeeeeeebb--bbebbbbbebee--eeeeeebe--bebebebbeeeeeeeeebbbbeeeeebeebeeebebeee:    

queryA       704:SMSCTDFSFHFPVCVQDLISPINVSLNFSL: 733
                :   *          * *   **       *:
3v4p_C_1     521:EANCRTHQAFMRKDVRDILTPIQIEAAYHL: 550
SecStr          :S EEEEEEEEE SS    SS EEEEEEEEE:    
ExpBur          :eeeeeeeebbbeeeeeeeeeebebebebeb:    


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