Protein Model on 3ije_A_1_E_1
(TEMPLATE: 
3ije
)Protein Model on 3ije_A_1_E_1
(TEMPLATE: 3ije
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DOWNLOAD: [sequence-replaced 3D model]
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [938 aa] | Integrin alpha-V :ITAV_HUMAN | |
| 2 | b | E 1 (E) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 399V(A) 400R(Q) 432R(M) 434L(Y) 447Q(S) 448V(L) 449Q(Y) 450T(N) (identity: 0.0 %/29.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3ije_A_1 identity=29.2% |
queryA 340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425
:** * * * * * * * * * * * **** * ** *:
3ije_A_1 145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244
SecStr :S STTTTTT TTSEEEE SSSEEEEEETTHHHHTBEEEEEEHHHHHHH TT SS TT EE GGG S BTSEEEEE SSSSS EEEEEET:
ExpBur :eebebebbbebbbbebbbbbeeebbbbbbbbbbeebbbbbbbebebbeeeeeeeeebbebeeebebeeeeeeeeebebbebbbbbebeeeeebbbbbbbb:
Contact : bb b
queryA 426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518
:* * * * * * * *** * * ****** * * * * * * * :
3ije_A_1 245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337
SecStr :THHHHT EEEEE ----SSSS EEEEEE SSTTS TTSEEEEE TTSSS EEE-EEETT EEE TTS EEE EEEEEE SSS EEEEEE SSTT--:
ExpBur :ebbeebbbbbbbb----beebeeeeebebeeeebebbbbbbbbbbbeeeebbbb-bbbbebebebeeeeeebbbbbbbbbbeeebebeeeebebeeee--:
Contact : b b bbbb
queryA 519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605
: *** ** * * ** * * ** * ******* ** *** ** ** ** * * * * * *** :
3ije_A_1 338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430
SecStr :S TTSEEEEEESTT SSS EEEEEETT SSSS EEEEEEEETTEE SS SEEEE ------- SSS EEEEEEEEE SSSSS EEEEEEGGGT:
ExpBur :bebbbbbbebbbbbeeeeebbbbbbbebbeeeebbbbbbbbeeebbeeeeebebeb-------eeeeeeeebbbbebbebebebbebebbbbbbbbbbbb:
queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697
: * *** * ** * * * * * * ** ** ** * * :
3ije_A_1 431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525
SecStr :EEEEE B EEEEEEEEEESS EE SS SB SSSSSB EEEEEEEEEEEE SSS S-----EEEEEEEEEESHHHHTTS EEETTT SSEEEEEE:
ExpBur :ebbbbbbbbbbebeeebebeeeebebeeeeeebeeeeeebbbbebebbbebeeeeeeee-----ebbbebbbbbbeebeeeeeebbbbbeeeebeeeeeb:
queryA 698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790
: * * * * ** * * * * *** * * * **** * * ** :
3ije_A_1 526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614
SecStr :EEESSS EEEEEEEEE TTT SS EEEEEEEEE-------- SSTT TT EE TTS SEEEEEEEE --STTTT EEEEEE- SS:
ExpBur :ebeeeeeeeeeebebbbeeeeebeeeeebbbbbbebeb--------eeeebeeeeebebeeeeeeeeeeeebbbbbee--beeeeebebebebebe-eee:
queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890
: * * * ** * * * * ** * * * * *** * * :
3ije_A_1 615:KKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709
SecStr : EEETTS EEEEEEEEEEE SS EES EEEEE TTEEEEEE- S TTSB EEEEE SSS--- EEEEE SEE- TT EEEEEEEEEE S S:
ExpBur :eebebbeebebbbebebbbeeebbbebebbbebbeebeeebb-beeeeebeebeeeeeeeee---eebbbbebeeeb-eeeeebebbbebbbebeeeeee:
queryA 891:SVELHANVTCNN: 902
:** *:
3ije_A_1 710:SVKFDLQIQSSN: 721
SecStr :EEEEEEEEE S :
ExpBur :bbebbbebebeb:
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[assembly_id:1]
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