Protein Model on 1mhp_D_1_F_1 (TEMPLATE: 1mhp )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) D 1 (B) polymer(polypeptide(L)) [192 aa] integrin alpha 1, (RESIDUES 169-360) :ITA1_RAT
2 b F 1 (Y) polymer(polypeptide(L)) [105 aa] FAB FRAGMENT, light chain 200T(E) 229L(R) 230L(Q) 266E 268T(H) 270S(N) 271G(Y) (identity: 14.3 %/30.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1mhp_D_1 identity=30.1%
queryA       155:VDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSN--TSYQFAAVQFSTSYKTEFDFSDYVKRKDP-DALLKHVKHMLLLTNTFGAINYVATEVFREELGA: 251
                : * *   *** *  *        *  *  *         *   **       **    *        *  * *      * *   *     * * *  **:
1mhp_D_1       3:LDIVIVLDGSNSIYP--WESVIAFLNDLLKRMDIGPKQTQVGIVQYGENVTHEFNLNKYSSTEEVLVAANKIVQRGGRQTMTALGIDTARKEAFTEARGA: 100
SecStr          :EEEEEEEE STT   --HHHHHHHHHHHHHTS BSTTSBEEEEEEESSSEEEEE TTT SSHHHHHHHHHT      SS  HHHHHHHHHHTTTSGGGT :    
ExpBur          :bbbbbbbbbbeebee--bebbbebbeebbeebebbeeebbbbbbbbbeeeeeebebeeeeebeebbebbeebeeebbeebebbebbbbbbeebbeeeebb:    
Contact         :                                               b                             bb                     

queryA       252:RPDATKVLIIITDGEATDSGNIDAA------KDIIRYIIGIGKHFQ-----TKESQETLHKFASKPASE: 309
                :*    **  * ****  *               * *  * *  *       *    *     ** *   :
1mhp_D_1     101:RRGVKKVMVIVTDGESHDNYRLKQVIQDCEDENIQRFSIAILGHYNRGNLSTEKFVEEIKSIASEPTEK: 169
SecStr          : TT EEEEEEEESS  TT TTHHHHHHHHHHTTEEEEEEEE HHHHHTT   HHHHHHHHTTS SSHHH:    
ExpBur          :beebeebbbbbbbbebebeeebeebbeebeeeebebbbbbbbbebeeeeeebeebbebbeebbbeeeee:    
Contact         :              b b bb                             b                                                  


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