[pdbjlvh2]Protein Model on 5mfk_B_1_D

Protein Model on 5mfk_B_1_D_1 (TEMPLATE: 5mfk )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IMA1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [240 aa]	YIII(Dq.V1)4CPAF
2	b		D 1 (D)	polymer(polypeptide(L)) [1 aa]	(KR)4	315R(W) 354E (identity: 50.0 %/35.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5mfk_B_1 identity=35.7%

queryA       253:LPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQ: 352
                :**  *  *   *   *       *    * ** *      *    *****          *  ** **  *  ** *  * ****     **        :
5mfk_B_1       6:LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVI: 105
SecStr          :HHHHHHGGG S HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHGGG S HHHH:    
ExpBur          :beebbeebebeeeeebbebbeebbebbeeeeeebeebbeeebbeebbebbeeeeeebbeebbebbbbbbebeeebbeebbebebbebbbebbebeeeebb:    
Contact         :                                                              b                                     

queryA       353:KEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAE: 452
                :*** *   **  *   ***     *    **  *  *     ******  *  **   ***  *   *   **  **       *     ** **     :
5mfk_B_1     106:KEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASGNN-EQIQKLIEAGALSPLVKLLDDASEEVIKEAVWAIANIASGNN: 204
SecStr          :HHHHHHHHHHHTS HHHHHHHHHTT HHHHHHTTSSS HHHHHHHHHHHHHHHTS H-HHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHHS H:    
ExpBur          :bbbbebbbbbbeeeeebbeebbeeebbebbbebbeeeeeebbebbbebbbbbbebee-ebbeebbeeebbebbbebbeeebeebbbbbbebbbbbbeeee:    
Contact         : b                                                                                                  

queryA       453:KLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFS: 497
                :            ** * *   * ** * ** * *      *   *:
5mfk_B_1     205:EMKQK------LEEAGALPALEKLQSHANEEVQKNAQAALEAFNS: 243
SecStr          :HHHHH------HHHHTHHHHHHHGGG S HHHHHHHHHHHHHHH :    
ExpBur          :ebbee------beeeebeeebeebeeeeeeebeebbeebbebbee:

Protein Model on 5mfk_B_1_D_1 (TEMPLATE: 5mfk )

Input Residue Numbers for Focused Sites