CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [421 aa] | IMPORTIN SUBUNIT ALPHA-1A :IMA1A_ORYSJ | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [7 aa] | A89NLS | 281G 283N 286I 321V 322T 323G 324T(D) 328T 357W 360S 361N 364A 396E 399W 402T(S) 403N 438L(T) 439V 442D(E) (identity: 78.9 %/52.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4b8p_A_1 identity=52.6% |
queryA 81:IVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISE: 180 : * * ** ** ***** * *** * * * ** ** * * *** ************* ** * * ** * * ** * *: 4b8p_A_1 41:MIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVRE: 140 SecStr :HHHHHHSS HHHHHHHHHHHHHHH SSS HHHHHTTT HHHHHHHTT TT HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHGGG S HHHHH: ExpBur :beebbeeeeeeebbebbbebbeebeeeeeebbeebbebebbebbbebbebeebeebbbbbbebbbbbbeeeeebbeebbeeebbebbbebbebebeebbb: queryA 181:QAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTD: 280 :******** *** **** ** **** * * *** ****** ** * * * ** * ** * * *** * *** *** *: 4b8p_A_1 141:QAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSM----LRNATWTLSNFCRGK-PQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSD: 235 SecStr :HHHHHHHHHHHH HHHHHHHHHTT HHHHHTT STT HHH----HHHHHHHHHHTT SS-S HHHHGGGHHHHHHHTT HHHHHHHHHHHHHHSS: ExpBur :bbbebbbbbbeeeeebbeebbeeebbeebbebbeeebeeeb----bebbbebbbbbbeee-eebebeebeebbebbbebbeeebeebbbbbbebbbbbbe: queryA 281:GPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLT-NPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLV: 379 :* * * * ** * ** ** **** ****** * *** ** ** **** * * * *** ** ****** **** * * * : 4b8p_A_1 236:GTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGII: 335 SecStr :SSHHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHTTTHHHHHHHHHHS HHHHHHHHHHHHHHTTS HHHHHHHHHHT H: ExpBur :eeeebbebbbeeebbebbbebbeeebeebbebbbebbbbbbebeeebbeebbeeebbebbbebbeeeeeeebbeebbebbbebbebeeebbeebbeeebb: Contact :b b b bbbb b b bb b queryA 380:PFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEK---------LSIMIEECGGL: 470 : ** * * * *** ** * **** ** *** * * ** ** * * * * ** * *** * * ** * **: 4b8p_A_1 336:GPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENIL----KVGETDKTLAAGDVNVFSQMIDEAEGL: 431 SecStr :HHHHHHHHHS HHHHHHHHHHHHHHHHH HHHHHHHHHTT HHHHHGGGG S HHHHHHHHHHHHHHH----HHHHHHHHHTT SS HHHHHHHHTTHH: ExpBur :eebbebbeebeeebeeebbebbbbbbeebeeebbeebbeeebbebbbebbebeeeebbbbbbebbbbbb----ebbeeeeeeeeeeebebbeebeebebb: Contact : b b bb bb b queryA 471:DKIEALQNHENESVYKASLSLIEKYF: 496 : *** ** * * * * * : 4b8p_A_1 432:EKIENLQSHDNNEIYEKAVKILEAYW: 457 SecStr :HHHHGGGG S HHHHHHHHHHHHHH : ExpBur :ebbeebeeeeeeebeebbbebbeebe: |