Protein Model on 2q7n_A_1_T_1 (TEMPLATE: 2q7n )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IL6RB_HUMAN) A 1 (A) polymer(polypeptide(L)) [480 aa] Leukemia inhibitory factor receptor :LIFR_MOUSE
2 b T 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 213N(V) (identity: 0.0 %/28.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2q7n_A_1 identity=28.4%
queryA       112:EQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHL----ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVW---------V: 198
                :   ***     * **  *  ***     *   * *  ** * *     *  **        *     *              *                 :
2q7n_A_1     273:DDDVYGTVVFAGYPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTL--------FESISGKSAVFHRIEGLTNETYRLGVQMHPGQEIHNFTL: 364
SecStr          :SS EEEEEEEEE       S EEEBSSSSEEEEEE   S     TTSS EEEE--------EETTT  EEEEE SS   SS EEEEEE  SS    EEEE:    
ExpBur          :eeeebebebbbbeebeebeebebbbebbeebbbbbbbbeebebbbeebbebbb--------ebeeeebeeebeeeeebeeeebebebebeeeebebebeb:    
Contact         :                                                                                                b   

queryA       199:EAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPS-------IKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKP: 291
                :   * **   *          * *  *  * *      *      *  *             * * *       *                   *  * *:
2q7n_A_1     365:TGRNPLGQAQSA-VVINVTERVAPHDPTSLKVKDIN--STVVTFSWYLPGNFTKINLLCQIEICKANSKKEVRNATI------RGAEDSTYHVAVDKLNP: 455
SecStr          :EEEETTEEEEEE-EE  GGGTB     EEEEEEE S--TT EEEEEEEEEE SSSEEEEEEEEB TTS  EEEEEEE------E  EEEEEEEEE S  S:    
ExpBur          :bbebeeeebeee-eebebeebbbbeebeebeeeeee--eebbebbbebebebeebebbbbbbbeeeeeeeeeeeeee------ebeeeeebebebeebee:    
Contact         :              b                                                                                     

queryA       292:FTEYVFRIRCMKEDGKGYWSDWSEEASGITYE: 323
                : * * ** **        ** ** *    * *:
2q7n_A_1     456:YTAYTFRVRCSSKTF-WKWSRWSDEKRHLTTE: 486
SecStr          :S  BB  EEEEESS -SS         B    :    
ExpBur          :eeebebebebbbeee-eeebeebeebeeebee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123