Protein Model on 1f6f_C_1_A_1 (TEMPLATE: 1f6f )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IL6RB_HUMAN) C 1 (C) polymer(polypeptide(L)) [169 aa] PROLACTIN RECEPTOR :PRLR_RAT
2 b A 1 (A) polymer(polypeptide(L)) [183 aa] PLACENTAL LACTOGEN :CSH_SHEEP 140K(E) 161K(E) 188T(S) 189V(I) 190Y(W) 191F(K) 192V(I) 210D 211H(P) 212I(L) 213N(Y) 215D 217V(T) 218Y (identity: 21.4 %/29.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1f6f_C_1 identity=29.1%
queryA       128:KPKNLSCIVNEGKKMRCEWDGGRETHLETNFTL----KSEWATHKFADCKAKRDTPTSC--TVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVK: 221
                :**    *         * *  *      **  *      *  *    * *     * **     *       *   * *        **    *  * * :
1f6f_C_1       6:KPEIHKCRSPDKETFTCWWNPGTXXXXXTNYSLTYSKEGEKTTYECPDYKT--SGPNSCFFSKQYTSIWKIYI-ITVNATXXXXXSSSDPLYVDVTYIVE: 102
SecStr          :  EEEEEEBSSSS EEEEEE   -----  EEEEEEESS S  EE S SST--T TTEEEE GGG  SSS EE-EEEEE -----     EEE GGG B :    
ExpBur          :ebebeebbbeeeebbbbebeebe-----eebbbbbeeeeeeeeeebeeeee--eeeebbebeeeebeeeeebb-bbbbbe-----eebeeeebebeebbe:    
Contact         :            b                        b                            bbbbb                 bbbb b bb   

queryA       222:PNPPHNLS--VINSEELSSILKLTWTNP----SIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSE: 315
                :* ** **   *         *   *  *             * *         *              * * ** *   *    **      **** ** :
1f6f_C_1     103:PEPPRNLTLEVKXXXXXKTYLWVKWSPPXXXXXXXXXXTMEYEIRLKXXXXXEWEI----HFTGHQTQFKVFDLYPGQKYLVQTRCKPDH--GYWSRWSQ: 196
SecStr          :    EEEEEEE -----   EEEEEE  ----------  EEEEEE -----  EE----EEEET SEEEE    SS EEEEEEEEE TT--        :    
ExpBur          :beebeebeeeee-----eeebbbebeee----------ebebbbbbe-----eeee----eebbeeeebebeebeeeeebebbbbbbbee--eeebeebe:    

queryA       316:EAS: 318
                :* *:
1f6f_C_1     197:ESS: 199
SecStr          : EE:    
ExpBur          :eee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123