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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [366 aa] | Nucleolar RNA helicase 2 :DDX21_HUMAN | |
2 | b | B 1 (A) | non-polymer(MG) | MAGNESIUM ION | 563K(N) (identity: 0.0 %/34.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6l5l_A_1 identity=34.4% |
queryA 20:MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEW: 119 : * * *** * * * ** *** * ** * * : 6l5l_A_1 20:VTFLFP--IQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGEXXXRKRGR--------------------------------------------: 73 SecStr : H--HHHHHHHHHHTT EEEE S HHHHHHHHHHHHHHHHH --- TT --------------------------------------------: ExpBur :beebbe--bbbebbebbeeeebbbbeeeebebbbbbbbbbbbbebeee---eeeeb--------------------------------------------: queryA 120:HGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIP: 219 : : 6l5l_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 220:PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR: 319 : ** * * **** * * ** : 6l5l_A_1 73:-----------------------------------------------------------------RAPQVLVLAPTRELANQVSKDFSDITK-----KLS: 102 SecStr :----------------------------------------------------------------- SEEEE SSHHHHHHHHHHHHHH S-----SS : ExpBur :-----------------------------------------------------------------bbbebbbbbbbeebbeebbebbeebbe-----ebb: queryA 320:ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS: 419 : ** * ** ** ****** * *** * **** * * * * * * *** : 6l5l_A_1 103:VACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKXXSEDNP-QTLLFSATC---------: 192 SecStr :EEEE SSS SHHHHHHHHH SEEEE HHHHHHHHHTT SS SEEEE HHHHHHTT HHHHHHHHHHH -- TT -EEEEEESS ---------: ExpBur :bbbbeeeeeeeebbeebeebbbbbbbbbebbeebbeeeebebeebebbbbbbbbebeeeebeeebeebbeebbe--eeeeb-bbbbbbeee---------: queryA 420:EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC: 519 : * ** * * * * * * * * * **** ** : 6l5l_A_1 193:------PHWVFNVAKKYMKSTYEQV-------------DLIKTAITVEHLAIKCH----------WTQRAAVIGD--VIRVYSGHQ-GRTIIFCETKKEA: 260 SecStr :------ HHHHHHHHHTS TT EEE-------------S B SS EEEEEEE ----------GGGHHHHHHH--HHHHHS TT- EEEEESSHHHH: ExpBur :------eeebeebbeebbeeeeeeb-------------bbeeeeeeeebbbbebe----------eeebbebbbb--bbebbbeee-bbbbbbbeeeeeb: queryA 520:DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV: 619 : * * * * **** * * * * * * ***** ** * ** * * ** ** *** * * * : 6l5l_A_1 261:QELSQ------NSAIKQDAQ----SLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFY: 350 SecStr :HHHHH------STTTTTTEE----EE TTS HHHHHHHHHHHHTTS SEEEEETTTTTT BSEEEESS S HHHHHHHHHTB TTB EEEEEEE: ExpBur :eebbe------eeebeeebe----bbbeebeeeeeeebbebbeeeebbbbbbbeebbeeeebbebbbbbbbbbbeebeebeebbeebbeeeebbbbbbbb: Contact : b queryA 620:ATEKE: 624 : *: 6l5l_A_1 351:QHKEE: 355 SecStr : GGGH: ExpBur :beebe: |