Protein Model on 6cz5_A_1_B_1 (TEMPLATE: 6cz5 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) A 1 (A) polymer(polypeptide(L)) [427 aa] ATP-dependent RNA helicase DDX3X :DDX3X_HUMAN
2 b B 1 (A) non-polymer(FPJ) 5'-O-[(R)-hydroxy(propanoylamino)phosphoryl]adenosine 22W(Y) 24L(R) 26T 29Q 49G 50S(C) 51G 305N(E) (identity: 50.0 %/34.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6cz5_A_1 identity=34.2%
queryA         1:MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS: 100
                :   **       *    *      **  *   ** *    *    * ** *** **  *     *                                   :
6cz5_A_1      52:IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGCGKTAAFLLPILSQIY-----------------------------------: 116
SecStr          : SSTTTS   HHHHHHHHHTT  S  HHHHHHHHHHHTT  EEEE SS TTTTHHHHHHHHHHHH-----------------------------------:    
ExpBur          :beebeeeebeebbeebbeebeeeebebbbbbbbbbbbeeebbbbbbbebeebbbbbbbbbbbbbb-----------------------------------:    
Contact         :                     b b b  b                   bbb                                                 

queryA       101:AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK: 200
                :                                                                                                    :
6cz5_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       201:GHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA--------------: 286
                :                                                                                                    :
6cz5_A_1     117:--------------------------------------------------------------------------------------SDGPGEALRAMKXX: 130
SecStr          :--------------------------------------------------------------------------------------HH S HHHHT  --:    
ExpBur          :--------------------------------------------------------------------------------------eebbeeebeeee--:    

queryA       287:---------PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS: 377
                :         *  *   * **** *       *         *     **     *   ** *    * ***** *    **  *     *******  * :
6cz5_A_1     131:XXXXXXKQYPISLVLAPTRELAVQIYEEARKFSY---RSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD: 227
SecStr          :------ B  SEEEE SSHHHHHHHHHHHHHHHT---TSS  EEEE SSS HHHHHHHHHT  SEEEE HHHHHHHHHTT B  TT  EEEETTHHHHHH:    
ExpBur          :------eeebbbbbbbbbeebbeebbebbbebbb---ebebebbbbbeeeebeebbebbeebbebbbbbbebbbebbeeeebbbeebebbbbbbbbbbbb:    
Contact         :                           b                                                                        

queryA       378:QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRP: 477
                : *    * *   *       * *      ***               **        *         *  *                             :
6cz5_A_1     228:MGFEPQIRRIVEQ-DTMPPKGVR-HTMMFSAT---------------FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV------------------: 292
SecStr          :TT HHHHHHHHTS-SS   BTTB-EEEEEES ---------------  HHHHHHHHHH SS EEEEBSS  SS SSEEEEE------------------:    
ExpBur          :bebeeebbebbee-eebbeeeeb-bbbbbbbb---------------eeeebeebbeebbeeebbbbbeeeeebeeebebeb------------------:    

queryA       478:GANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA: 576
                :       * *     *             *     *  **   * **      *           *   ****    *   *  *  *    *  * ***:
6cz5_A_1     293:------VWVEESD--KRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG---------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA: 375
SecStr          :------EE  GGG--HHHHHHHHHHTS SS  EEEEESSHHHHHHHHHHHHTTT---------  EEEE STTHHHHHHHHHHHHHSSSS EEEEETTTT:    
ExpBur          :------eebeeee--beeebbebbeeeeeeebbbbbbeeeeebeebbeebeeee---------bebbbbbeeeeeeeeeebbeebeeeebebbbbbbebb:    

queryA       577:RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL: 618
                :** **  *  ***  **     ******* **    *** * :
6cz5_A_1     376:RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF: 417
SecStr          :TT     BSEEEESS  SSHHHHHHHHTTB  SSS EEEEEE:    
ExpBur          :eeeebeebebbbbbbbbeebeebbbbbbbbbeeeeebebbbb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123