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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [419 aa] | ATP-dependent RNA helicase DDX19B :DD19B_HUMAN | |
2 | b | F 1 (A) | non-polymer(MLI) | MALONATE ION | 378Q 382D 385N(I) 421K (identity: 75.0 %/34.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6b4k_A_1 identity=34.3% |
queryA 256:VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP: 347 : * * * ** ** * * * * * *** ** * * * * * * * ** ***: 6b4k_A_1 76:LMLAEPPQNLIAQSQ-SGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFY--PELKLAYAVRGNKLERGQKISEQ---IVIGTP: 169 SecStr :HHHSSS EEEEE -TTSSHHHHHHHHHHHH TTS S EEEE SSHHHHHHHHHHHHHHTTT --TT EEEESTT TT S---EEEE H: ExpBur :bbbeeeeebbbbbbb-bbbbbbbbbbbbbbbebeeeeeebbbbbbbbeeebbebbbeebeebbeeb--eebebbbbbeeeeeeeeeebeeb---bbbbbb: queryA 348:GRLDDLVSTGK-LNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV: 445 :* * * * ****** ** * * * * *** * * * * ** * ** : 6b4k_A_1 170:GTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP------RNCQMLLFSATFED-SVWKFAQKVVPDPNVIKLKREEETLDTIKQYY: 262 SecStr :HHHHHHHTTT GGG EEEE HHHHTTSHHHHHHHHHHHHHS ------TTSEEEEEES H-HHHHHHHHHSSS EEEEE TTEEEEE: ExpBur :bbbbebbbeeebbebeebebbbbbbbbbbbeeeebeeebbebbeebb------eebbbbbbbbeeee-ebeebbeebbeeebbbebeeeebebeebebbb: Contact : b b b b queryA 446:VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL: 545 :* * * * ** ** *** * * * *** *: 6b4k_A_1 263:VLCSSRDEKF-------------------------------QALCNLYG-----AIXXA---QAMIFCHTRKTASWL-------AAELSKEGHQVAL--L: 314 SecStr :EE SSHHHHH-------------------------------HHHHHHHT-----T -- --- EEEEESSHHHHHHH-------HHHHHHTT EE--E: ExpBur :bebeeeeebb-------------------------------ebbeebbe-----ee--e---ebbbbbeeeebbeeb-------beebeeeeeebbe--b: queryA 546:HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK------QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY: 639 : * * *** * * * * ***** * *** ** * * **** *** * : 6b4k_A_1 315:SGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGXXXXXGKRGLAVNMVDSK-----------------: 397 SecStr : TTS HHHHHHHHHHHHTTS SEEEEEHHHHTT S EEEESS B TTSSB HHHHHHH ----- EEEEEEE SH-----------------: ExpBur :bbebebeebbebbeebbeeebebbbbbbebbeebbeeeeebbbbbbbbeeeeeebbbebbeebbe-----eeebbbbbbbbee-----------------: queryA 640:NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD: 676 : * * * ** * * *: 6b4k_A_1 398:--------------HSMNILNRIQEHFNKKIERLDTD: 420 SecStr :--------------HHHHHHHHHHHHH EE TT: ExpBur :--------------ebbebbeebeeebeeebeebebe: |