Protein Model on 5zc9_A_1_C_1 (TEMPLATE: 5zc9 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) A 1 (A) polymer(polypeptide(L)) [378 aa] Eukaryotic initiation factor 4A-I :IF4A1_HUMAN
2 b C 1 (A) non-polymer(ANP) PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER 262P(Q) 263D(S) 264G 266I(T) 267V(G) 268K 269S(T) 371E 408A 578G 580D 582H(Q) 605R 608R 609A(F) (identity: 53.3 %/33.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5zc9_A_1 identity=33.9%
queryA       249:FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP: 347
                : *   *      *  *   *          *      *  **   * **** *          *           ***   *     *      * ****:
5zc9_A_1      52:LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTP: 147
SecStr          :HHHHTT  EEEE  TT-SSHHHHHHHHHHHH  TTS S  EEEE SSHHHHHHHHHHHHHHTTTTT  EEE---E TTS HHHHHHHHHH   SEEEE H:    
ExpBur          :ebbeeeebbbbbbebb-bebbbbbbbbbbebbeeeeebbbbbbbbbbebbbebbbebbeebbeebebebbb---bbbeeeeeebbeebeeeebbbbbbbb:    
Contact         :             bbb bbbb                                                                               

queryA       348:GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP: 447
                :**  *      *        ******  ** *  * *          *      **   ***  * **     * *  *     * *             :
5zc9_A_1     148:GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYIN: 240
SecStr          :HHHHHHHHTTSS  TT  EEEETTHHHHTSTTTHHHHHHHHTTS TT ------EEEEEES   H-HHHHHGGGT SS EEE   GGG S TTEEEEEEE:    
ExpBur          :ebbeebbeeeebeeeebebbbbbbbbebbeeebeeebeebeeebeeeb------bbbbbbbbbbe-ebbeebeebbeebeebeeeeeebbbeebebbbbe:    
Contact         :                       b                                    b                                       

queryA       448:VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG: 547
                :*        **                        * *      *   *    *      ** **  *    * *                 *     **:
5zc9_A_1     241:V--------ER------------------------EEWK--LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHG: 292
SecStr          :E--------ES------------------------GGGH--HHHHHHTHHHHTTS-----EEEEE S HHHHHHHHHHH---------HHTT   EEE T:    
ExpBur          :b--------ee------------------------eeeb--bebbbebbebbeeb-----bbbbbbeeeebbeebbeeb---------eeeeeebbbbbe:    

queryA       548:DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
                :*    **      *  *  * ** **  *****   *  ***  **    ** ***** **  * * **  *  *                ***   *:
5zc9_A_1     293:DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE: 385
SecStr          :TS HHHHHHHHHHHHTTS  EEEE GGGTSS   TTEEEEEESS  SSHHHHHHHHTTSSGGG  EEEEEEEEHHHHHHHHHH-----HHHHT   EE:    
ExpBur          :ebebeebeebbeebeeeebebbbbbebbbbbbebeebbbbbbbbbbeeebbbbbbbbbbbbeeeebbbbbbbbeebbeebeeb-----beebebebee:    
Contact         :                              b b b                      b  bb                                      


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