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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [433 aa] | ATP-dependent RNA helicase DDX3X :DDX3X_HUMAN | |
2 | b | B 1 (A) | non-polymer(AMP) | ADENOSINE MONOPHOSPHATE | 4F 22W(Y) 24L(R) 25P 26T 29Q 48T 49G 50S 51G 52K 53T (identity: 83.3 %/34.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5e7j_A_1 identity=34.5% |
queryA 1:MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS: 100 : ** * * ** * ** * * * ****** ** * * : 5e7j_A_1 47:IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIY-----------------------------------: 111 SecStr : SSGGGS HHHHHHHHHTT S HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHHH-----------------------------------: ExpBur :beebeeeebeebbeebbeebeeeebeebbebbbbbbeeebbbbbbbeeebebbbbbbbbbbbbbb-----------------------------------: Contact : b b bbb b bbbbbb queryA 101:AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK: 200 : : 5e7j_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 201:GHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA--------------: 286 : : 5e7j_A_1 112:--------------------------------------------------------------------------------------SDGPGEALRAMKXX: 125 SecStr :--------------------------------------------------------------------------------------HH S HHHHTT --: ExpBur :--------------------------------------------------------------------------------------eebeeeebeeee--: queryA 287:---------PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS: 377 : * * * **** * * * ** * ** * * ***** * ** * ******* * : 5e7j_A_1 126:XXXXXXKQYPISLVLAPTRELAVQIYEEARKFSY---RSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD: 222 SecStr :------ B SEEEE SSHHHHHHHHHHHHHHST---TSS EEEE SSS HHHHHHHHHT SEEEE HHHHHHHHHTT B TT EEEEETHHHHHH: ExpBur :------eebbbbbbbbbbeebbeebbebbeebbb---ebebebbbbbeeeebeebbeebeebbebbbbbbebbbebbeeeebbbeebebbbbbbbbbbbe: queryA 378:QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRP: 477 : * * * * * * *** ** * * * : 5e7j_A_1 223:MGFEPQIRRIVEQ-DTMPPKGVR-HTMMFSAT---------------FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV------------------: 287 SecStr :TT HHHHHHHHHS-SS BTTB-EEEEE SB--------------- HHHHHHHHHH SS EEEEESS B TTTTEEEEE------------------: ExpBur :bbbeeebbebbee-eebbeeeeb-bbbbbbbb---------------eeeebeebbeebbeeebebbbeeeeeebeebebeb------------------: queryA 478:GANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA: 576 : * * * * * ** * ** * * **** * * * * * * ***: 5e7j_A_1 288:------VWVEESD--KRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG---------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA: 370 SecStr :------EE GGG--HHHHHHHHHTT TT EEEEES HHHHHHHHHHHHHTT--------- EEEE TTS HHHHHHHHHHHHTTSS EEEEEHHHH: ExpBur :------eebeeee--beeebbebbeeeeeebbbbbbbeeeeebeebbebbeeee---------eebbbbbeeeeeeeeeebbeebeebebebbbbbbeeb: queryA 577:RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL: 618 :** ** * *** ** ******* ** *** * : 5e7j_A_1 371:RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF: 412 SecStr :TT BSEEEESS S HHHHHHHHTTB SSS EEEEEE: ExpBur :eeebbeebebbbbbbbbeebebbebbbbbbbeeeeebebbbb: |