Protein Model on 5e7j_A_1_B_1 (TEMPLATE: 5e7j )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) A 1 (A) polymer(polypeptide(L)) [433 aa] ATP-dependent RNA helicase DDX3X :DDX3X_HUMAN
2 b B 1 (A) non-polymer(AMP) ADENOSINE MONOPHOSPHATE 4F 22W(Y) 24L(R) 25P 26T 29Q 48T 49G 50S 51G 52K 53T (identity: 83.3 %/34.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5e7j_A_1 identity=34.5%
queryA         1:MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS: 100
                :   **       *    *      **  *   ** *    *    * ****** **  *     *                                   :
5e7j_A_1      47:IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIY-----------------------------------: 111
SecStr          : SSGGGS   HHHHHHHHHTT  S  HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHHH-----------------------------------:    
ExpBur          :beebeeeebeebbeebbeebeeeebeebbebbbbbbeeebbbbbbbeeebebbbbbbbbbbbbbb-----------------------------------:    
Contact         :   b                 b bbb  b                  bbbbbb                                               

queryA       101:AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK: 200
                :                                                                                                    :
5e7j_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       201:GHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA--------------: 286
                :                                                                                                    :
5e7j_A_1     112:--------------------------------------------------------------------------------------SDGPGEALRAMKXX: 125
SecStr          :--------------------------------------------------------------------------------------HH S HHHHTT --:    
ExpBur          :--------------------------------------------------------------------------------------eebeeeebeeee--:    

queryA       287:---------PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS: 377
                :         *  *   * **** *       *         *     **     *   ** *    * ***** *    **  *     *******  * :
5e7j_A_1     126:XXXXXXKQYPISLVLAPTRELAVQIYEEARKFSY---RSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD: 222
SecStr          :------ B  SEEEE SSHHHHHHHHHHHHHHST---TSS  EEEE SSS HHHHHHHHHT  SEEEE HHHHHHHHHTT B  TT  EEEEETHHHHHH:    
ExpBur          :------eebbbbbbbbbbeebbeebbebbeebbb---ebebebbbbbeeeebeebbeebeebbebbbbbbebbbebbeeeebbbeebebbbbbbbbbbbe:    

queryA       378:QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRP: 477
                : *    * *   *       * *      ***               **        *         *  *                             :
5e7j_A_1     223:MGFEPQIRRIVEQ-DTMPPKGVR-HTMMFSAT---------------FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV------------------: 287
SecStr          :TT HHHHHHHHHS-SS   BTTB-EEEEE SB---------------  HHHHHHHHHH SS EEEEESS B TTTTEEEEE------------------:    
ExpBur          :bbbeeebbebbee-eebbeeeeb-bbbbbbbb---------------eeeebeebbeebbeeebebbbeeeeeebeebebeb------------------:    

queryA       478:GANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA: 576
                :       * *     *             *     *  **   * **      *           *   ****    *   *  *  *    *  * ***:
5e7j_A_1     288:------VWVEESD--KRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG---------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA: 370
SecStr          :------EE  GGG--HHHHHHHHHTT  TT  EEEEES HHHHHHHHHHHHHTT---------  EEEE TTS HHHHHHHHHHHHTTSS EEEEEHHHH:    
ExpBur          :------eebeeee--beeebbebbeeeeeebbbbbbbeeeeebeebbebbeeee---------eebbbbbeeeeeeeeeebbeebeebebebbbbbbeeb:    

queryA       577:RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL: 618
                :** **  *  ***  **     ******* **    *** * :
5e7j_A_1     371:RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF: 412
SecStr          :TT     BSEEEESS  S HHHHHHHHTTB  SSS EEEEEE:    
ExpBur          :eeebbeebebbbbbbbbeebebbebbbbbbbeeeeebebbbb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123