Protein Model on 4ljy_A_1_D_1 (TEMPLATE: 4ljy )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) A 1 (A) polymer(polypeptide(L)) [451 aa] Pre-mRNA-processing ATP-dependent RNA helicase PRP5 :PRP5_YEAST
2 b D 1 (A) non-polymer(MRD) (4R)-2-METHYLPENTANE-2,4-DIOL 594D(K) 596K(F) (identity: 0.0 %/31.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4ljy_A_1 identity=31.1%
queryA        26:TDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRAT: 125
                :* **    * *  * **     ******     *    *                                                             :
4ljy_A_1      75:TPIQSQALPAIUSGRDVIGISKTGSGKTISYLLPLLRQV-------------------------------------------------------------: 113
SecStr          : HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHH-------------------------------------------------------------:    
ExpBur          :ebbbbbbbbbbbbbebbbbbbeeebebebbbbbbbbebb-------------------------------------------------------------:    

queryA       126:KGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQ: 225
                :                                                                                                    :
4ljy_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       226:ALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA------------PKALIVEPSRELAEQTLNNIKQFKKYI: 313
                :                                                                         *  **  * **** *       *    :
4ljy_A_1     114:-------------------------------------------------------------KAQRPLSKHETGPUGLILAPTRELALQIHEEVTKFTEA-: 151
SecStr          :-------------------------------------------------------------HTS    TT    SEEEE SSHHHHHHHHHHHHHHHTT-:    
ExpBur          :-------------------------------------------------------------eebeebeeebbbbbbbbbbbeeeebeebeebbeebbee-:    

queryA       314:DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST--GK-LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL----QVIVC: 406
                :     *     **     *   *  *  *** ****  *      ** *      * * **** *   *            ** *   *      *    :
4ljy_A_1     152:-DTSIRSVCCTGGSEUKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVUDEADRLFDLGFE----------PQITQIUKTVRPDKQCVLF: 240
SecStr          :- TT  EEEESS S THHHHHHHTT  SEEEE HHHHHHHTTHHHHTSS STT  EEEETTHHHHHHTT H----------HHHHHHHHHS TT EEEEE:    
ExpBur          :-eeebebbbbbeeeeeeebbeebeebbbbbbbbbebbbebeeeeeeebbebebbbbbbbbbbbebbeeeee----------eebeebbeebbeebbbbbb:    

queryA       407:SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM: 506
                :***              * *          *   *                     * *                 *   *                 * :
4ljy_A_1     241:SATFPN-KLRSFAVRVLHSPISITINSKGUVNENVKQKFRICHSEDEKFDNLVQLIHERS----------------EFFDEVQSXXXXXXXXXXXXDAK-: 322
SecStr          :ES   H-HHHHHHHHHSSS EEEEESSS SS TTSEEEEEEESSHHHHHHHHHHHHHHHH----------------HHHHHHT ------------   -:    
ExpBur          :beebee-ebeebbeebbeeebbbebeeeeebeeebebebebbeeeeebbeebbebbeebe----------------eebeeeee------------eeb-:    

queryA       507:DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV: 606
                :  ****      **         *               *      **  *** **      * ** *  **     *  **          ***  ** :
4ljy_A_1     323:--AIIFVSSQNICDFISKKLLNAG---------IVTCAIHAGKPYQERLUNLEKFKREKNSILLCTEVLSRGLNVPEVSLVIIYNAVKTFAQYVHTTGRT: 411
SecStr          :--EEEEES HHHHHHHHHHHHHTT---------   EEE TTS HHHHHHHHHHHHHSTT EEEEEHHHHHT      SEEEESS  SSHHHHHHHHGGG:    
ExpBur          :--bbbbbeeeeebeebeeebeeee---------bebbbbbeebeeeeeeebbeebeeeeebbbbbbbebbeebebeebbbbbbbbbbeebeebeebbebb:    
Contact         :                                                                                       b b          

queryA       607:GRAERMGLAISLV: 619
                : *  * * ** * :
4ljy_A_1     412:ARGSRSGTAITLL: 424
SecStr          :  GGG  EEEEEE:    
ExpBur          :eeeeebbbbbbbb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123