Protein Model on 4d25_A_1_E_1 (TEMPLATE: 4d25 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) A 1 (A) polymer(polypeptide(L)) [427 aa] BMVLG PROTEIN :O01378_BOMMO
2 b E 1 (D) non-polymer(GOL) GLYCEROL 374G(C) 573D(A) 577R (identity: 33.3 %/36.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4d25_A_1 identity=36.5%
queryA        25:PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRA: 124
                :** **   ** *  * *    * ****** **  * *       **                                                      :
4d25_A_1      73:PTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINMLLQDPKD------------------------------------------------------: 118
SecStr          :  HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHHHHHHS   ------------------------------------------------------:    
ExpBur          :bbbbbbbbbbbbeeebbbbbbbbbbbebbbbbbbbbbbbbbeeeee------------------------------------------------------:    

queryA       125:TKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKN: 224
                :                                                                                                    :
4d25_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       225:QALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA---------PKALIVEPSRELAEQTLNNIKQFKKYIDN: 315
                :                                                                       *   ** * ***  *  *    *      :
4d25_A_1     119:--------------------------------------------------------------LISENGCAQPQVIIVSPTRELTLQIFNEARKFSY---G: 153
SecStr          :-------------------------------------------------------------- EEETTEEE SEEEE SSHHHHHHHHHHHHHHTT---T:    
ExpBur          :--------------------------------------------------------------eeeeeebbebbbbbbbbbebbbebbbebbebbbe---e:    

queryA       316:PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDV: 415
                :  *      ** * * *      *  * * ***** * *         *** *** **  *  *    *  *    *      ** *    ***    * :
4d25_A_1     154:SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDQADCMLDMGFMPSIEKMMLH-PTMVETTKR-QTLMFSATFPE-DI: 250
SecStr          :SS  EEEE TTS HHHHHHHHHT  SEEEE HHHHHHHHHTTSB STT  EEEEETHHHHTSTTTHHHHHHHHT -TTS  GGGS-EEEEEES   H-HH:    
ExpBur          :bebebbbbbbebeeeebbeebeebbbbbbbbbebbbebbeeeebbbeebbbbbbbbbbbbbeeeebeebeebbee-eebeeeeeb-bbbbbbbbbee-eb:    
Contact         :                                                          b                                         

queryA       416:KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT: 515
                :  *                                    *    *       **                 *  *  *       * *        *  *:
4d25_A_1     251:QHLAGRFLN----------------------------NYLFVAVGIVGGASTDVE------------QIFIEVTKYEKRNSLKQLIEENDGKRILVFVET: 310
SecStr          :HHHHGGG S----------------------------S EEEEESSTT   TTEE------------EEEEE  TTTHHHHHHHHHHHTTT  EEEE S :    
ExpBur          :beebeebbe----------------------------eebbbbbeeebbbbebbe------------bebeebeeeebeebbeebbeebeeebbbbbbee:    

queryA       516:KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA: 615
                :*   *        *         *      ****   **   *  ** *    *  * ***** **  *  * *  **     ******* **    * *:
4d25_A_1     311:KRNADFIAAMLSEQ---------QLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKA: 401
SecStr          :HHHHHHHHHHHHHH---------SS EEEE TTS HHHHHHHHHHHHHSS SEEEE GGGTSS   TT  EEEESS  S HHHHHHHHTTSS TT  EEE:    
ExpBur          :eeebeebbebbeee---------eeebbbbbeeeebeebbebbebbeeeebbbbbbbebbbbbbebeebebbbbbbbbeebeebbbbbbbbbbebeebeb:    
Contact         :                                                         b   b                                      

queryA       616:ISLVATEKE: 624
                : *       :
4d25_A_1     402:VSFYDSDQD: 410
SecStr          :EEEE HHHH:    
ExpBur          :bbbbbeeeb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123