Protein Model on 4ct4_B_1_G_1 (TEMPLATE: 4ct4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) B 1 (B) polymer(polypeptide(L)) [378 aa] PROBABLE ATP-DEPENDENT RNA HELICASE DDX6 :DDX6_HUMAN
2 b G 1 (B) non-polymer(MG) MAGNESIUM ION 295S(T) 296R 297E 555K(N) (identity: 50.0 %/36.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4ct4_B_1 identity=36.0%
queryA         4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103
                :*       *      ** *  *  ** ****  * * * *  *  * ** **  **                                            :
4ct4_B_1       7:FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE-----------------------------------------:  65
SecStr          :GGGG   HHHHHHHHHTT  S  HHHHHHHHHHHTT  EEEE  SSGGGHHHHHHHHHH-----------------------------------------:    
ExpBur          :beebebeeebeebbeeeeeeebeebbeebbbbbbeeebbbbebeebbebbbbbbbbbbb-----------------------------------------:    

queryA       104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203
                :                                                                                                    :
4ct4_B_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---------KALIVEP: 294
                :                                                                                              *    *:
4ct4_B_1      66:------------------------------------------------------------------------------------RLDLKKDNIQAMVIVP:  81
SecStr          :------------------------------------------------------------------------------------H  TT  S  EEEE S:    
ExpBur          :------------------------------------------------------------------------------------ebeeeeeebbbbbbbb:    

queryA       295:SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV: 394
                : **** *      *  *     *       **   **    *   *  *  ****  **   *      *   ****** ****   **   *   *   :
4ct4_B_1      82:TRELALQVSQICIQVSKHMGGAKV--MATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ---DFVQIMEDIILTL: 176
SecStr          :SHHHHHHHHHHHHHHTTTSSS  E--EEE TTS HHHHHHHTTS  SEEEE HHHHHHHHHTTSS  TT  EEEEESHHHHTST---TTHHHHHHHHTTS:    
ExpBur          :eebbbebbbebbeebbeebeebeb--bbbbeeeeeeebeeebeeebbbbbbbbebbbebbeeebbebeebebbbbbbbbebbee---eeeeebeebbeeb:    
Contact         :bbb                                                                                                 

queryA       395:TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG: 494
                :    *  *    ***     * *        *    *  *                 * *              **               *        :
4ct4_B_1     177:P---KNRQILLYSATF-PLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYV----TER------------QKVHCLNT---------LFSRL------: 241
SecStr          : ---TT EEEEEES  - HHHHHHHHHH SS EEEE     B TT EEEEEE ---- GG------------GHHHHHHH---------HHHHS------:    
ExpBur          :b---eebbbbbbbbee-eeebeebbeebbeebeebebeeeeebeebebebbeb----eee------------ebbebbeb---------beeee------:    

queryA       495:EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD: 594
                :             * ****        *     * *          **   *       *      *  *  * * ***   *****  *  ***   * :
4ct4_B_1     242:----------QINQSIIFCNSSQRVELLAKKISQLG---------YSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPK: 322
SecStr          :----------  SEEEEE SSHHHHHHHHHHHHHTT---------  EEEE TTS HHHHHHHHHHHHTTS SEEEE TT   GGG TTEEEEEESS  S:    
ExpBur          :----------ebebbbbbbeeeeebeebbeebeeee---------bebeebbeebeeeebbebbeebeeeebebbbbbeebebbeebeebebbbbbbbbe:    
Contact         :                                                            b                                       

queryA       595:EKQNYVHRIGRVGRAERMGLAISLVA: 620
                :    * ***** **    **** *  :
4ct4_B_1     323:LAETYLHRIGRSGRFGHLGLAINLIT: 348
SecStr          : HHHHHHHH B BTTB  SEEEEEE :    
ExpBur          :ebeebeebbbbbeeeeebebbbbbbb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123