Protein Model on 4c9b_A_1_K_1 (TEMPLATE: 4c9b )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) A 1 (A) polymer(polypeptide(L)) [389 aa] EUKARYOTIC INITIATION FACTOR 4A-III :IF4A3_HUMAN
2 b K 1 (A) non-polymer(GOL) GLYCEROL 493K(C) 496Y 497A(D) 538H(A) 540F (identity: 40.0 %/33.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4c9b_A_1 identity=33.8%
queryA         3:AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF: 102
                : *  **                *  **   *  *  * **      * ***  *** * *                                        :
4c9b_A_1      39:TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ----------------------------------------:  98
SecStr          :SGGGS   HHHHHHHHHHT  S  TTHHHHHHHHHTT  EEEE STTSSHHHHHHHHHHH----------------------------------------:    
ExpBur          :ebeebebeeebbebbeeeeeeebeebbbbbbbbbeeeebbbbbbeeebebebbbbbbbbe----------------------------------------:    

queryA       103:AIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH: 202
                :                                                                                                    :
4c9b_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       203:VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---------KALIVE: 293
                :                                                                                               ***  :
4c9b_A_1      99:-------------------------------------------------------------------------------------CLDIQVRETQALILA: 113
SecStr          :-------------------------------------------------------------------------------------T  TTS S  EEEE :    
ExpBur          :-------------------------------------------------------------------------------------ebebeeeebbbbbbb:    

queryA       294:PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ: 393
                :* **** *          *           ***         *  *   * *****  *      *       *******  *  *    *       * :
4c9b_A_1     114:PTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP: 210
SecStr          :S HHHHHHHHHHHHHHTTTTT---  EEE   GGGHHHHHHHHHH  SEEEE HHHHHHHHHHTSS  TT  EEEETTHHHHHHHT HHHHHHHHHTS T:    
ExpBur          :beeebbeebbeebeebbeebe---bebbbbebeeeeeebeeebebbbbbbbbebeebbbbbeeebbeeeebebbbbbebbebbeeeeeeebebbeeebee:    

queryA       394:VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK: 493
                : *      **   ****          * *  *     *             * *        **                        * *      * :
4c9b_A_1     211:AT------QVVLISATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER------------------------EEWK--FDTLC: 269
SecStr          :T ------EEEEEES  - HHHHHHHHHH SS EEEEE    EE TTEEEEEEEE--------ES------------------------GGGH--HHHHH:    
ExpBur          :eb------bbbbbbeee-eebbeebbeebbeebbebbeeeeeeebeebebbbbeb--------ee------------------------eeeb--bebbe:    
Contact         :                                                                                                   b

queryA       494:GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP: 593
                :  *    *      ** *** **   * *                 *     ***    **      *  *  * ** ***   * *   *   **  **:
4c9b_A_1     270:DLYDTLTIT-----QAVIFCNTKRKVDWLTEKM---------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWXXGLDVPQVSLIINYDLP: 355
SecStr          :HHHHHS  S-----EEEEE SSHHHHHHHHHHH---------HHTT  EEEE TTS HHHHHHHHHHHHHTS SEEEE S  --    TTEEEEEESS  :    
ExpBur          :ebeeebebe-----bbbbbbeeeebbeebbeeb---------eeeeeebbbbbeebeeeeeeebbeebeeeebebbbbbeee--eeebeeeebbbbbbbb:    
Contact         :  bb                                        b b                                                     

queryA       594:DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
                :     * ***** **  * * **  *                   * *   *:
4c9b_A_1     356:NNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE: 402
SecStr          :SSSTHHHHHH EESTT   EEEEEEEEGGGHHHHHHH-----HHHHT   EE:    
ExpBur          :eeeeebbebbbeebeebeeebbbbbbbeebeebbeeb-----eeeeeeebee:    


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