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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [389 aa] | EUKARYOTIC INITIATION FACTOR 4A-III :IF4A3_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [277 aa] | PRE-MRNA-SPLICING FACTOR CWC22 HOMOLOG :CWC22_HUMAN | 7M 8G 36I 37L(I) 38G(K) 39G 62Q 366F(M) 402Q 446V 447P(A) 457E 485W 490K(D) 491I(T) 494G(D) 495E(L) 496Y 497A(D) 498V(T) 499R(L) 500A(T) 501I 502K(T) 538H(A) 539Q(N) 540F 541S(T) 564G 565D(A) 566V(S) 567R 583G(Q) 645E (identity: 44.1 %/33.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4c9b_A_1 identity=33.8% |
queryA 3:AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF: 102 : * ** * ** * * * ** * *** *** * * : 4c9b_A_1 39:TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ----------------------------------------: 98 SecStr :SGGGS HHHHHHHHHHT S TTHHHHHHHHHTT EEEE STTSSHHHHHHHHHHH----------------------------------------: ExpBur :ebeebebeeebbebbeeeeeeebeebbbbbbbbbeeeebbbbbbeeebebebbbbbbbbe----------------------------------------: Contact : bb bbbb b queryA 103:AIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH: 202 : : 4c9b_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 203:VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---------KALIVE: 293 : *** : 4c9b_A_1 99:-------------------------------------------------------------------------------------CLDIQVRETQALILA: 113 SecStr :-------------------------------------------------------------------------------------T TTS S EEEE : ExpBur :-------------------------------------------------------------------------------------ebebeeeebbbbbbb: Contact : b queryA 294:PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ: 393 :* **** * * *** * * * ***** * * ******* * * * * : 4c9b_A_1 114:PTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP: 210 SecStr :S HHHHHHHHHHHHHHTTTTT--- EEE GGGHHHHHHHHHH SEEEE HHHHHHHHHHTSS TT EEEETTHHHHHHHT HHHHHHHHHTS T: ExpBur :beeebbeebbeebeebbeebe---bebbbbebeeeeeebeeebebbbbbbbbebeebbbbbeeebbeeeebebbbbbebbebbeeeeeeebebbeeebee: Contact : b queryA 394:VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK: 493 : * ** **** * * * * * * ** * * * : 4c9b_A_1 211:AT------QVVLISATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER------------------------EEWK--FDTLC: 269 SecStr :T ------EEEEEES - HHHHHHHHHH SS EEEEE EE TTEEEEEEEE--------ES------------------------GGGH--HHHHH: ExpBur :eb------bbbbbbeee-eebbeebbeebbeebbebbeeeeeeebeebebbbbeb--------ee------------------------eeeb--bebbe: Contact : b bb b b bb queryA 494:GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP: 593 : * * ** *** ** * * * *** ** * * * ** *** * * * ** **: 4c9b_A_1 270:DLYDTLTIT-----QAVIFCNTKRKVDWLTEKM---------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWXXGLDVPQVSLIINYDLP: 355 SecStr :HHHHHS S-----EEEEE SSHHHHHHHHHHH---------HHTT EEEE TTS HHHHHHHHHHHHHTS SEEEE S -- TTEEEEEESS : ExpBur :ebeeebebe-----bbbbbbeeeebbeebbeeb---------eeeeeebbbbbeebeeeeeeebbeebeeeebebbbbbeee--eeebeeeebbbbbbbb: Contact :bbbbbbbbb bbbb bbbb b queryA 594:DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645 : * ***** ** * * ** * * * *: 4c9b_A_1 356:NNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE: 402 SecStr :SSSTHHHHHH EESTT EEEEEEEEGGGHHHHHHH-----HHHHT EE: ExpBur :eeeeebbebbbeebeebeeebbbbbbbeebeebbeeb-----eeeeeeebee: Contact : b |