Protein Model on 4c9b_A_1_B_1 (TEMPLATE: 4c9b )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) A 1 (A) polymer(polypeptide(L)) [389 aa] EUKARYOTIC INITIATION FACTOR 4A-III :IF4A3_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [277 aa] PRE-MRNA-SPLICING FACTOR CWC22 HOMOLOG :CWC22_HUMAN 7M 8G 36I 37L(I) 38G(K) 39G 62Q 366F(M) 402Q 446V 447P(A) 457E 485W 490K(D) 491I(T) 494G(D) 495E(L) 496Y 497A(D) 498V(T) 499R(L) 500A(T) 501I 502K(T) 538H(A) 539Q(N) 540F 541S(T) 564G 565D(A) 566V(S) 567R 583G(Q) 645E (identity: 44.1 %/33.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4c9b_A_1 identity=33.8%
queryA         3:AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF: 102
                : *  **                *  **   *  *  * **      * ***  *** * *                                        :
4c9b_A_1      39:TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ----------------------------------------:  98
SecStr          :SGGGS   HHHHHHHHHHT  S  TTHHHHHHHHHTT  EEEE STTSSHHHHHHHHHHH----------------------------------------:    
ExpBur          :ebeebebeeebbebbeeeeeeebeebbbbbbbbbeeeebbbbbbeeebebebbbbbbbbe----------------------------------------:    
Contact         :    bb                           bbbb                      b                                        

queryA       103:AIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH: 202
                :                                                                                                    :
4c9b_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       203:VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---------KALIVE: 293
                :                                                                                               ***  :
4c9b_A_1      99:-------------------------------------------------------------------------------------CLDIQVRETQALILA: 113
SecStr          :-------------------------------------------------------------------------------------T  TTS S  EEEE :    
ExpBur          :-------------------------------------------------------------------------------------ebebeeeebbbbbbb:    
Contact         :                                                                                     b              

queryA       294:PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ: 393
                :* **** *          *           ***         *  *   * *****  *      *       *******  *  *    *       * :
4c9b_A_1     114:PTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP: 210
SecStr          :S HHHHHHHHHHHHHHTTTTT---  EEE   GGGHHHHHHHHHH  SEEEE HHHHHHHHHHTSS  TT  EEEETTHHHHHHHT HHHHHHHHHTS T:    
ExpBur          :beeebbeebbeebeebbeebe---bebbbbebeeeeeebeeebebbbbbbbbebeebbbbbeeebbeeeebebbbbbebbebbeeeeeeebebbeeebee:    
Contact         :                                                                        b                           

queryA       394:VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK: 493
                : *      **   ****          * *  *     *             * *        **                        * *      * :
4c9b_A_1     211:AT------QVVLISATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER------------------------EEWK--FDTLC: 269
SecStr          :T ------EEEEEES  - HHHHHHHHHH SS EEEEE    EE TTEEEEEEEE--------ES------------------------GGGH--HHHHH:    
ExpBur          :eb------bbbbbbeee-eebbeebbeebbeebbebbeeeeeeebeebebbbbeb--------ee------------------------eeeb--bebbe:    
Contact         :        b                                           bb         b                           b    bb  

queryA       494:GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP: 593
                :  *    *      ** *** **   * *                 *     ***    **      *  *  * ** ***   * *   *   **  **:
4c9b_A_1     270:DLYDTLTIT-----QAVIFCNTKRKVDWLTEKM---------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWXXGLDVPQVSLIINYDLP: 355
SecStr          :HHHHHS  S-----EEEEE SSHHHHHHHHHHH---------HHTT  EEEE TTS HHHHHHHHHHHHHTS SEEEE S  --    TTEEEEEESS  :    
ExpBur          :ebeeebebe-----bbbbbbeeeebbeebbeeb---------eeeeeebbbbbeebeeeeeeebbeebeeeebebbbbbeee--eeebeeeebbbbbbbb:    
Contact         :bbbbbbbbb                                   bbbb                      bbbb               b          

queryA       594:DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
                :     * ***** **  * * **  *                   * *   *:
4c9b_A_1     356:NNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE: 402
SecStr          :SSSTHHHHHH EESTT   EEEEEEEEGGGHHHHHHH-----HHHHT   EE:    
ExpBur          :eeeeebbebbbeebeebeeebbbbbbbeebeebbeeb-----eeeeeeebee:    
Contact         :                                                   b                                                


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