Protein Model on 3peu_A_2_B_1 (TEMPLATE: 3peu )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) A 2 (A) polymer(polypeptide(L)) [178 aa] ATP-dependent RNA helicase DBP5 :DBP5_YEAST
2 b B 1 (B) polymer(polypeptide(L)) [295 aa] Nucleoporin GLE1 :GLE1_YEAST 513C(V) 514R(A) 547G 554R 572T 573D(N) 574V 594D(T) 595E(D) 597Q(A) (identity: 40.0 %/45.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3peu_A_2 identity=45.1%
queryA       509:AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD------EKQNYVHR: 602
                : ***  **     *        *     **  *   ****    **      *  *    ** * * ******  *  * *  **           * **:
3peu_A_2      39:SIIFVATKKTANVLY-------GKLKSEGHEVSI--LHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSUVVNYDLPTLANGQADPATYIHR: 129
SecStr          :EEEE S HHHHHHHH-------HHHHTTT  EEE--E TTS HHHHHHHHHHHHHTS SEEEE  S  TT   TTEEEEEESS  B TTS B HHHHHHH:    
ExpBur          :bbbbbeeeebbeebe-------eebeeeeeebbb--bbeebeeeeeeeebeebeeeebebbbbebeebeebebeebebbbbbbbbeeeeeebbbebbebb:    
Contact         :    bb                                b      b                 bbb                   bbbbb  b b     

queryA       603:IGRVGRAERMGLAISLV: 619
                :*** *   * * *** *:
3peu_A_2     130:IGRTGXXGRKGVAISFV: 146
SecStr          :GGGG -- TT EEEEEE:    
ExpBur          :bebbe--eeebbbbbbb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123