Protein Model on 3nbf_D_1_M_1 (TEMPLATE: 3nbf )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) D 1 (D) polymer(polypeptide(L)) [202 aa] Heat resistant RNA dependent ATPase :Q72GF3_THET2
2 b M 1 (D) non-polymer(8OD) [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl phosphono hydrogen phosphate 294P 295S(T) 296R 297E 325G 346T 348G 349R 378Q(M) 380Y(F) (identity: 70.0 %/35.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3nbf_D_1 identity=35.7%
queryA         4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103
                :*      ***  *        ** * *   ** * * *    *    *** **  *           *  * *      *                    :
3nbf_D_1       3:FKDFPLKPEILEALHGRGLTTPTPIEAAALPLALEGKDLIGQAXXXXGKTLAFALPIAERLAPS---QERGRKPRALVLT--------------------:  79
SecStr          :GGGS   HHHHHHHHTTT     HHHHHHHHHHHTT  EEEE ----  THHHHHHHHHH    ---  TT   SEEEE --------------------:    
ExpBur          :beebebeeebeebbeeeeeeebeebbeebbeebeeeebbbbbe----ebebbbbbbbbeebeee---eeeebebbbbbbb--------------------:    

queryA       104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203
                :                                                                                                    :
3nbf_D_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL: 303
                :                                                                                   * **   * **** *  :
3nbf_D_1      73:-----------------------------------------------------------------------------------PRALVLTPTRELALQVA:  89
SecStr          :----------------------------------------------------------------------------------- SEEEE SSHHHHHHHH:    
ExpBur          :-----------------------------------------------------------------------------------bbbbbbbbeeeebeebb:    
Contact         :                                                                                          bbbb      

queryA       304:NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV: 403
                :            * *      **     *   *  * * ** ****  *    * * ** *   ******  ** *            *         * :
3nbf_D_1      90:SELTAVA-----PHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATP------PSRQT: 178
SecStr          :HHHHHH -----TTS EEEE SSS SHHHHHHHHH  SEEEE HHHHHHHHHTTSS  TT SEEEESSHHHHHHTT HHHHHHHHHHS ------TTSEE:    
ExpBur          :eebeebb-----eebebbebebeeeeeebeebbeebbbbbbbbbebbbebeeeebbebeebebbbbbebbebeeeebeeebbebbeebe------eebbb:    
Contact         :                     b                    b bb                            b b                       

queryA       404:IVCSATLHSFDVKKLSEKIMHFPTWVDL: 431
                :   **** *   * * *  *  *     :
3nbf_D_1     179:LLFSATLPSW-AKRLAERYMKNPVLINV: 205
SecStr          :EEE SS  HH-HHHHHHHH SS EEEE :    
ExpBur          :bbbbeebeeb-beebbeebbeeeeebee:    


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