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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [206 aa] | Heat resistant RNA dependent ATPase :Q72GF3_THET2 | |
2 | b | G 1 (B) | non-polymer(8OD) | [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl phosphono hydrogen phosphate | 4F 22W(L) 24L(T) 25P 26T 29Q(E) 48T 49G 50S(T) 51G 52K 53T 54G(L) 305N(E) (identity: 57.1 %/36.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3nbf_B_1 identity=36.7% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103 :* *** * ** * * ** * * * * ** *** ** * * * * * : 3nbf_B_1 3:FKDFPLKPEILEALHGRGLTTPTPIEAAALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPS---QERGRKPRALVLT--------------------: 79 SecStr :GGGS HHHHHHHHHHT S HHHHHHHHHHHTT EEEE TTS THHHHHHHHHH --- TT SEEEE --------------------: ExpBur :beebebeeebeebbeeeeeeebbebbeebbeebeeeebbbbbbeeeeeeebbbbbbbbeebeee---eeeebebbbbbbb--------------------: Contact :b b bbb b bbbbbbb queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203 : : 3nbf_B_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL: 303 : * ** * **** * : 3nbf_B_1 73:-----------------------------------------------------------------------------------PRALVLTPTRELALQVA: 89 SecStr :----------------------------------------------------------------------------------- SEEEE SSHHHHHHHH: ExpBur :-----------------------------------------------------------------------------------bbbbbbbbbeebbeebb: queryA 304:NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV: 403 : * * ** * * * * ** **** * * * ** * ****** ** * * * : 3nbf_B_1 90:SELTAVA-----PHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATP------PSRQT: 178 SecStr :HHHHHH -----TTS EEEE TTS HHHHHHHHHH SEEEE HHHHHHHHHHTSS TT SEEEEE HHHHHHTT HHHHHHHHHTS ------TTSEE: ExpBur :eebeebb-----eebebbbbbbeeeeeebeebbeebbbbbbbbbebbbebeeeebbebeebebbbbbebbebeeeeeeeebbebbeebe------eebbb: Contact : b queryA 404:IVCSATLHSFDVKKLSEKIMHFPTWVDL: 431 : **** * * * * * * : 3nbf_B_1 179:LLFSATLPSW-AKRLAERYMKNPVLINV: 205 SecStr :EEE SS HH-HHHHHHHH SS EEEE : ExpBur :bbbbeebeeb-beebbeebbeeeeebee: |