[pdbjlvh2]Protein Model on 3ex7_C_1_L

Protein Model on 3ex7_C_1_L_1 (TEMPLATE: 3ex7 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [392 aa]	Eukaryotic initiation factor 4A-III :IF4A3_HUMAN
2	b		L 1 (C)	non-polymer(AF3)	ALUMINUM FLUORIDE	48T(S) 49G 52K 371E 408A 578G 605R 608R (identity: 87.5 %/34.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3ex7_C_1 identity=34.4%

queryA         3:AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF: 102
                : *  **                *  **   *  *  * **      * ***  *** * *                                        :
3ex7_C_1      39:TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ----------------------------------------:  98
SecStr          : GGGS   HHHHHHHHHHT  S  TTHHHHHHHHHTT  EEEE  TTSSHHHHHHHHHHH----------------------------------------:    
ExpBur          :ebeebebeeebbebbeeeeeeebbebbbebbebbeeeebbbbbbebbbebbbbbbbbbbb----------------------------------------:    
Contact         :                                             bb  b                                                  

queryA       103:AIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH: 202
                :                                                                                                    :
3ex7_C_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       203:VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---------KALIVE: 293
                :                                                                                               ***  :
3ex7_C_1      99:-------------------------------------------------------------------------------------CLDIQVRETQALILA: 113
SecStr          :-------------------------------------------------------------------------------------T  TTS S  EEEE :    
ExpBur          :-------------------------------------------------------------------------------------ebebeeeebbbbbbb:    

queryA       294:PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ: 393
                :* **** *          *           ***         *  *   * *****  *      *       *******  *  *    *       * :
3ex7_C_1     114:PTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPP: 210
SecStr          :SSHHHHHHHHHHHHHHTTTTT---  EEEE TTS HHHHHHHHHH  SEEEE HHHHHHHHHTTSS  TT  EEEEETHHHHTSTTTHHHHHHHHTTS T:    
ExpBur          :bbebbbebbbebbeebbeebe---bebbbbbbeeeeeebeeebeebbbbbbbbbebbbbbbeeebbebebbebbbbbbbbebbeeebeeebeebeeebee:    
Contact         :                                                                             b                      

queryA       394:VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK: 493
                : *      **   ****          * *  *     *             * *        **                        * *      * :
3ex7_C_1     211:AT------QVVLISATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER------------------------EEWK--FDTLC: 269
SecStr          :T ------EEEEEES  - HHHHTGGGGT SS EEE   GGG S TTEEEEEEE --------SS------------------------TTHH--HHHHH:    
ExpBur          :eb------bbbbbbbbb-beebbebbeebbeebbebbbeeeebbbebbebbbeeb--------ee------------------------eeeb--beebb:    
Contact         :              b                                                                                     

queryA       494:GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP: 593
                :  *    *      ** *** **   * *                 *     ***    **      *  *  * ** *** *** *   *   **  **:
3ex7_C_1     270:DLYDTLTIT-----QAVIFCNTKRKVDWLTEKM---------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLP: 355
SecStr          :HHHHHHTTS-----EEEEE SSHHHHHHHHHHH---------HHTT   EEE TTS HHHHHHHHHHHHHTS  EEEE GGGSSS   TTEEEEEESS  :    
ExpBur          :ebbebbeeb-----bbbbbbeeeebbeebbeeb---------eeeeeebbbbbeebebeebeebbeebeeeebebbbbbebbbbbbebeebbbbbbbbbb:    
Contact         :                                                                                    b               

queryA       594:DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
                :     * ***** **  * * **  *                   * *   *:
3ex7_C_1     356:NNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE: 402
SecStr          :SSHHHHHHHHTTSSGGG  EEEEEEE TTTHHHHHHH-----HHHHT  EEE:    
ExpBur          :eeebbbbbbbbbbbbeeeebbbbbbbeeebeeebeeb-----beebebebee:    
Contact         :           b  b

Protein Model on 3ex7_C_1_L_1 (TEMPLATE: 3ex7 )

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