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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [343 aa] | Eukaryotic initiation factor 4A-I :IF4A1_HUMAN | |
2 | b | G 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 412S 417K(E) 420E(K) (identity: 33.3 %/32.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2zu6_A_1 identity=32.7% |
queryA 249:FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP: 347 : * * * * * * * ** * **** * * *** * * * ****: 2zu6_A_1 46:LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTP: 141 SecStr :S S EEEE TT-STTSHHHHHHHHTT TT S EEEE SSHHHHHHHHHHHHHHHHHHT EEE--- STTHHHHHHHHHHH SEEEE H: ExpBur :eeeeeeebbbbebeeb-bbebeebbbebbebbeeeeebbbbbbbbbeeebbeebbeebbeebeeeebebbb---bebeeeeeebbeebeeeebbbbbbbb: queryA 348:GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP: 447 :** * * ****** ** * * * * ** *** * ** * * * * * : 2zu6_A_1 142:GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYIN: 234 SecStr :HHHHHHHTTTSS STT EEEEETHHHHHHTT HHHHHHHHHTS TT ------EEEEEESS H-HHHHHHHHH SS EEEEE EESTTEEEEEE : ExpBur :eebeebbeeeebeeeebebbbbbbbbebbeeebeeebeebeeebeeeb------bbbbbbeeeee-ebeebbeebbeeeeebbeeeeeeebeebebbebe: Contact : b b b queryA 448:VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG: 547 :* ** * * * * * ** ** * * * * * : 2zu6_A_1 235:V--------ER------------------------EEWK--LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHX: 286 SecStr : --------SS------------------------HHHH--HHHHHHHHHHTT S-----SEEEE S HHHHHHHHHTT---------TTTT EE -: ExpBur :b--------ee------------------------eeeb--bebbbebbeeeebe-----ebbbbbeeeeebeebbeeb---------eeeebebeebe-: queryA 548:DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645 : * * * * ** ** ***** * *** ** ** ***** ** * ** * * *** *: 2zu6_A_1 287:XXXXXXRDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGXKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE: 379 SecStr :------ HHHHHTGGGSSS EEEE HHHHTTS TTS SEEEESS SSTHHHHHHH EETTT - EEEEEE HHHHHHHHHH-----HHHHT EE: ExpBur :------eeeeeeeeeeeeeebebbbbebbeebebbebebbbbbbbbeeeebbbebbbbbeeee-ebebbbbbbeeeeeebeeb-----beebebebee: |