[pdbjlvh2]Protein Model on 2gxs_A_1_B

Protein Model on 2gxs_A_1_B_1 (TEMPLATE: 2gxs )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [207 aa]	heat resistant RNA dependent ATPase :O07897_THETH
2	b		B 1 (B)	polymer(polypeptide(L)) [207 aa]	heat resistant RNA dependent ATPase :O07897_THETH	6E(D) 7M(F) 8G(P) 27D(P) 30A 31E(A) 34P 35L 43L(I) 423M 425F(N) 426P 427T(V) 428W(L) 429V(I) 430D(N) 431L(V) (identity: 29.4 %/37.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2gxs_A_1 identity=37.1%

queryA         4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103
                :*      ***  *        ** ***   ** * * *    * ** *** **  *           *  * *      *                    :
2gxs_A_1       3:FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPS---QERGRKPRALVLT--------------------:  79
SecStr          :GGGSS  HHHHHHHHHTT  S  HHHHHHHHHHTTT  EEEE  TTS HHHHHHHHHHHH    ---  TT   SEEEE --------------------:    
ExpBur          :beebebeeebbeebeeeeeeebeebbeebbeebeeeebbbbbbeeebebebbbbbbbbeebeee---eeeebebbbbbbb--------------------:    
Contact         :  bbb                  b  bb  bb       b                                                            

queryA       104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203
                :                                                                                                    :
2gxs_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL: 303
                :                                                                                   * **   * **** *  :
2gxs_A_1      73:-----------------------------------------------------------------------------------PRALVLTPTRELALQVA:  89
SecStr          :----------------------------------------------------------------------------------- SEEEE SSHHHHHHHH:    
ExpBur          :-----------------------------------------------------------------------------------bbbbbbbbeeebbeebb:    

queryA       304:NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV: 403
                :            * *      **     *   *  * * ** ****  *    * * ** *   ******  ** *            *         * :
2gxs_A_1      90:SELTAVA-----PHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATP------PSRQT: 178
SecStr          :HHHHHH -----TTS EEEE SSS SHHHHHHHHH  SEEEE HHHHHHHHHHTSS  TT SEEEE SHHHHHHTT HHHHHHHHHTS ------TTSEE:    
ExpBur          :eebeebb-----eebebbbbbeeeeeeebeebbeebbbbbbbbbebbbbbeeeebbebeebebbbbbebbebeeeeebeebbebbeebe------eebbb:    

queryA       404:IVCSATLHSFDVKKLSEKIMHFPTWVDL: 431
                :   **** *   * * *  *  *     :
2gxs_A_1     179:LLFSATLPSW-AKRLAERYMKNPVLINV: 205
SecStr          :EEE SS  HH-HHHHHHHH SS EEEE :    
ExpBur          :bbbbbebeeb-beebbeebbeeeeebee:    
Contact         :                   b bbbbbbb

Protein Model on 2gxs_A_1_B_1 (TEMPLATE: 2gxs )

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