[pdbjlvh2]Protein Model on 1hv8_B_1_H

Protein Model on 1hv8_B_1_H_1 (TEMPLATE: 1hv8 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [363 aa]	PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669 :H669_METJA
2	b		H 1 (B)	non-polymer(SO4)	SULFATE ION	48T 49G 50S 51G 52K 53T (identity: 100.0 %/36.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1hv8_B_1 identity=36.2%

queryA         4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF: 102
                :* *      *  *        *****   *** *         * ******  * ** *  * *                                    :
1hv8_B_1       8:FNELNLSDNILNAIRNKGFEKPTDIQUKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNEN-----------------------------------:  72
SecStr          :GGGSS  HHHHHHHHHHT  S  HHHHHHHHHHHHT SEEEEE  SSSSHHHHHHHHHHHHS SS-----------------------------------:    
ExpBur          :beebebeeebbebbeeeeeeebbbbbbebbeebbeeeebbbbbbbeebebbbbbbbbbbbebeee-----------------------------------:    
Contact         :                                             bbbbbb                                                 

queryA       103:AIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH: 202
                :                                                                                                    :
1hv8_B_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       203:VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQT: 302
                :                                                                                  *   * *  * **** * :
1hv8_B_1      73:----------------------------------------------------------------------------------NGIEAIILTPTRELAIQV:  90
SecStr          :----------------------------------------------------------------------------------SS  EEEE S HHHHHHH:    
ExpBur          :----------------------------------------------------------------------------------eebbbbbbbbeeebbeeb:    

queryA       303:LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ: 402
                :   *   *    *  *    * ** *   *   * *   ********  *    * ***  *    *****  *  *         *         *   :
1hv8_B_1      91:ADEIESLK---GNKNLKIAKIYGGKAIYPQIKALKNA-NIVVGTPGRILDHINRGTLNLKNVKYFILDEADEULNUGFIKDVEKILN------ACNKDKR: 180
SecStr          :HHHHHHHH--- SS   EEEE TTS HHHHHHHHHT -SEEEE HHHHHHHHHTTSS GGG  EEEEETHHHHHTTTTHHHHHHHHH------TS SS E:    
ExpBur          :beebeebb---eebebebbebbeeeeeeebeeebeeb-bbbbbbbeebbebbeeeebebeebebbbbbbbbebbeeeeeeebeebbe------ebeeebb:    

queryA       403:VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK: 502
                :    ***        *  *          *           *                                   *  *        **         :
1hv8_B_1     181:ILLFSATUPR-EILNLAKKYUGDYSFIKAKINANIEQSYVEV-----------------------------------NENERFEALCRLLK---------: 235
SecStr          :EEEEESS  H-HHHHHHHHH  SEEEEE  STTTSEEEEEEE----------------------------------- GGGHHHHHHHHH ---------:    
ExpBur          :bbbbbeeebe-ebeebbeeebeeeeebebebeebbebbbbeb-----------------------------------eeeebeebbbeebe---------:    

queryA       503:EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR: 602
                :  *      ** ** *   *       *         *     ***     *      **    * ** ***  ****      ***  **     * **:
1hv8_B_1     236:-NKEFYGLVFCKTKRDTKELASULRDIG---------FKAGAIHGDLSQSQREKVIRLFKQKKIRILIATDVUSRGIDVNDLNCVINYHLPQNPESYUHR: 325
SecStr          :-STT  EEEE SSHHHHHHHHHHHTTTT---------  EEEE SSS HHHHHHHHHHHHHTSSSEEEE TTHHHH   S  SEEEESS  SSHHHHHHH:    
ExpBur          :-eeebbbbbbbeeeeebeebbeebeeee---------bebbbbbeebeeeebeebbeebeeeebebbbbbeebbeeeeeeebebbbbbbbbeebebbbeb:    

queryA       603:IGRVGRAERMGLAISLVATEKEKVWYHV: 630
                :*** ***   * ***       *     :
1hv8_B_1     326:IGRTGRAGKKGKAISIINRREYKKLRYI: 353
SecStr          :STTT  TTS  EEEEEEESTTHHHHHHH:    
ExpBur          :bebbeebeeebebbbbbbeebeeebeeb:

Protein Model on 1hv8_B_1_H_1 (TEMPLATE: 1hv8 )

Input Residue Numbers for Focused Sites