[pdbjlvh2]Protein Model on 6zfk_A_1_H

Protein Model on 6zfk_A_1_H_1 (TEMPLATE: 6zfk )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TMPS2_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [223 aa]	Cationic trypsin :TRY1_BOVIN
2	b		H 1 (A)	non-polymer(479)	4-oxo-N-[(1S)-1-(pyridin-3-yl)ethyl]-4-(thiophen-2-yl)butanamide	260E(Y) 266A(T) 376E(Q) 379C 380W(L) 399A(C) 401K (identity: 28.6 %/41.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6zfk_A_1 identity=41.0%

queryA       256:IVGGESALPGAWPWQVSLHVQNVHVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGAGYQVEKVISHPNYDSKTKNNDIALMKLQKPL: 355
                :****        * ****     * **** *   * * ****                       *  *     * * ** * * * **** * **    :
6zfk_A_1       1:IVGGYTCGANTVPYQVSLN-SGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNI-NVVEGNEQFISA----SKSIVHPSYNSNTLNNDIMLIKLKSAA:  94
SecStr          : BS EE  TTSSTTEEEEE-SSSEEEEEEEEETTEEEE GGG  SS EEEES SST-TS  S  EEEEE----EEEEE TT  TTT TT  EEEEESS  :    
ExpBur          :bbeeeebeebebebbbbbb-eeebbbbbbbbeeebbbbbbebeeeebebebbbbeb-eeeeeebbebeb----eeeeebeebeeeeeebbbbbbbbeeeb:    
Contact         :    b     b                                                                                         

queryA       356:TFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKT-SEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNNIWW: 454
                :  *  *    **           * ***** *   *     **   *        * *   *   **  * *** * *  ********** * *      :
6zfk_A_1      95:SLNSRVASISLPTSCASAGTQ--CLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKS--AYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGK----: 186
SecStr          :  BTTB   B  SS   TT E--EEEEES    SSS    SS EEEEEEB  HHHHHH--HSTTT  TTEEEES TT S B  TT TT EEEETTE----:    
ExpBur          :eeeeebeebebbeeebeeeee--bebbbbbbeeeeeeeebbebbbbebbbbeeeebee--bbeeebeebbbbbbeeebeebbbebbbbbbbbbeee----:    
Contact         :                    b  bb                   b b                                                     

queryA       455:LIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMRAD: 491
                :* *  *******    ****  *     **       :
6zfk_A_1     187:LQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN: 223
SecStr          :EEEEEEE SSSS TT  EEEEEGGGGHHHHHHHHHH :    
ExpBur          :bbbbbbbeeebbeeeebbbbbebbebeebbeebeeee:

Protein Model on 6zfk_A_1_H_1 (TEMPLATE: 6zfk )

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