Protein Model on 6a8o_A_2_D_2 (TEMPLATE: 6a8o )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) A 2 (A) polymer(polypeptide(L)) [236 aa] Plasma kallikrein :KLKB1_MOUSE
2 b D 2 (A) non-polymer(MAN) alpha-D-mannopyranose 353K(T) 354P 356T(N) (identity: 33.3 %/43.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6a8o_A_2 identity=43.5%
queryA       256:IVGGESALPGAWPWQVSLHVQNV---HVCGGSIITPEWIVTAAHCVEKPLNNPWHWTAFAGILRQSFMFYGA-GYQVEKVISHPNYDSKTKNNDIALMKL: 351
                :****  *  * ******* *  *   * ******   *  *****       *  *    ***  *              * *  *     * **** **:
6a8o_A_2       1:IVGGTNASLGEWPWQVSLQVKLVSQTHLCGGSIIGRQWVLTAAHCFDG-IPYPDVWRIYGGILSLSEITKETPSSRIKELIIHQEYKVSEGNYDIALIKL:  99
SecStr          : BS EE  TTS TTEEEEEEESSSEEEEEEEEE SSSEEEE GGGGSS-   GGGEEEEES SBSTT STTS  EEEEEEEE TT  TTS SS  EEEEE:    
ExpBur          :bbeeeebeeeebbbbbbbbbeeeeeebebbbbbbbeebbbbbbebbee-eeeeeebbbbbebebbeebeeebeebebeeebebeebeeeeeeebbbbbbb:    

queryA       352:QKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKNN: 451
                :* **      **  **           **  *** * * * *   *  *   *     *   *  *  *   *****   *  * * ********     :
6a8o_A_2     100:QTPLNYTEFQKPISLPSKADTNTIYTNCWVTGWGYTKEQGETQNILQKATIPLVPNEECQKKY-RDYVINKQMICAGYKEGGTDACKGDSGGPLVCKHSG: 198
SecStr          :SS     SS    B   GGGTT    SEEEEES  SSTT    SB EEEE  EE TTTHHHH -SSS   TTEEEE  TTT  B  TT TT EEEE  SS:    
ExpBur          :eeebeeeeebeebeebeeeeeeeebeebebbbbbeeeeeeeeeeebbebebebeeeeebeeeb-eeeebeeebbbbbeeeeebbbbebbbbbbbbbeeee:    
Contact         : bb b                                                                                               

queryA       452:IWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                : * * * **** ***    ****  *    ***     :
6a8o_A_2     199:RWQLVGITSWGEGCARKDQPGVYTKVSEYMDWILEKTQ: 236
SecStr          :S BEEEEEEE SSSS TT  EEEEEGGGGHHHHHHH  :    
ExpBur          :eebbbbbbbeeeebbeeeebbbbbbbbebbebbeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123