Protein Model on 4ogx_A_1_C_1 (TEMPLATE: 4ogx )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TMPS2_HUMAN) A 1 (A) polymer(polypeptide(L)) [236 aa] Plasma kallikrein :KLKB1_HUMAN
2 b C 1 (L) polymer(polypeptide(L)) [212 aa] DX-2930 LIGHT CHAIN 389E 390K 417D 418N(Y) 463S(E) 467K(R) (identity: 50.0 %/44.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4ogx_A_1 identity=44.2%
queryA       256:IVGGESALPGAWPWQVSLHVQ---NVHVCGGSIITPEWIVTAAHCVEK-PLNNPWHWTAFAGILRQSFMFYGAGY-QVEKVISHPNYDSKTKNNDIALMK: 350
                :****     * ******* *      * **** *   *  *****    **   *      ***  *         *    * * **     * **** *:
4ogx_A_1       1:IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWR--IYSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIK:  98
SecStr          : BS EE  TTTSTTEEEEEEESSSEEEEEEEEEEETTEEEE GGGGSS   GGGEE--EE S SBGGG  TTS  B EEEEEE TT  TTSSTT  EEEE:    
ExpBur          :bbeeeebeeeebbbbbbbbbeeeeeebebbbbbbbeebbbbbbebbeeeeeeebbb--bbbebbebeeeeeeeeebebeebbebeebeeeeeebbbbbbe:    

queryA       351:LQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAGFLQGNVDSCQGDSGGPLVTSKN: 450
                :** **      **  **  *        **  ***   ***     *      *     *  **  *  **  * ***   *  * * ********   *:
4ogx_A_1      99:LQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRY-QDYKITQRMVCAGYKEGGKDACKGDSGGPLVCKHN: 197
SecStr          :ESS    BTTB   B   GGGTT    SEEEEES  SSTT    SB EEEE  EE HHHHHHT -TTS   TTEEEE  TT   B  TT TTSEEEEEET:    
ExpBur          :beeebeeeeebeebebbeeebeeeebeebebbbbbbeeeebeeeeebbbbebeeeeeeebeeeb-eeeebbeebbbbbeeebeebbbebbbbbbbbbeee:    
Contact         :                                      bb                          bb                                

queryA       451:NIWWLIGDTSWGSGCAKAYRPGVYGNVMVFTDWIYRQMR: 489
                :  * * * **** ***    ****  *    ***     :
4ogx_A_1     198:GMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKTQ: 236
SecStr          :TEEEEEEEEEE SSSS TT  EEEEEGGGGHHHHHHHH :    
ExpBur          :eeebbbbbbbeeeebbeeebbbbbbebeebbebbeeeee:    
Contact         :            b   b                                                                                   


Input Residue Numbers for Focused Sites

ex) 2,15,123